Erigeron canadensis (horseweed): 122611193
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Entry
122611193 CDS
T07610
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00270
Cysteine and methionine metabolism
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122611193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122611193
03032 DNA replication proteins [BR:
ecad03032
]
122611193
03036 Chromosome and associated proteins [BR:
ecad03036
]
122611193
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ecad02048
]
122611193
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122611193
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122611193
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122611193
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122611193
Prokaryotic defense system [BR:
ecad02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122611193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
122611193
NCBI-ProteinID:
XP_043640110
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All DBs
Position
8:complement(42563354..42569024)
Genome browser
AA seq
864 aa
AA seq
DB search
MVANNCDGVTINKSQPPHAPPSIQISPTGCRRSPRLVGCSNSGKGIPVNSDKTPVKKKQK
VEAVSCSVSEVSFFIGDPVPDDEARRRWPWRYHSQSQELNNKRRYPNTKNDDDDDDQLVL
NVKCHYLQAKIEGKVFDLGDCATVKGEEGGHNHVGRILEFFKTNDGEDYFRVQWFFRAED
TVIKDAAASNNKKRLFYSTLMNDNPLDCIVSKVKVLKKPPGVNLKSISPCDFYYDMQYNI
DYSTFCTIKNDVSSDHGSLSPSYNEEIHSNGVVNHNSNETIASLEPHKLELTLLDLYSGC
GGMSTGLCFGAKLSGVDLSAKWAVDANSWACESLRLNHPETQIRNESAEDFRDLIKEWDK
LCQKFADKKEETQGQDFMCTGSPDNIIPSKADNRVSKDEYEVEKMVDICYSELGGTSKRG
LQFKVRWAGYGPSDDTWEPVKQLSNCEEKIREFVQKGIKAKILPRPGDVDIICGGPPCQG
ISGYNRHRNWDSPLEDEKNYQIVVFMEIIKFLRPKYILMENVVDILRFANGCLGRYAISS
LVGEYYQVRLGIIAAGCYGLPQFRLRVFLWGAHADEHLPPFPLPTHDVILKYGPPIGFER
NVVAYDEGGSRNLEKCVLLGDAISDLPPVSNSESRDVMKYTSAPETEFQKFIRASKSDML
GIATGSSCKVEKSVLHDHRPFELNEDDHLRVCRVPKRKGANFRDLPGVVSDDDNVVSRTP
DTELMPSGKHWVPEYAINFNDGKNTKSFGRLWWDETVSTVLCMPNYRSEAILHPEQDRCL
TIRENARLQGFPDFYALCGSVKERYRQVGNAVAVPVGRALGYTLGMAVQKLTGNEPLLTL
PAKFAHSTTLELLHPSLATKPEVP
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtggctaacaactgtgacggcgtcaccatcaacaaatcccaaccaccacatgcgccg
ccatcaatccaaatttcgcctaccggatgtagacgatcaccaagactagttggctgcagt
aattccggcaagggcattcctgtaaattccgacaaaacaccggttaagaagaagcaaaag
gttgaagctgtttcttgttccgtcagtgaagtttctttcttcatcggtgatcctgttcct
gatgacgaggctcgccggagatggccttggcgttatcattctcagtctcaggaactcaat
aataaacgacgctatccgaacaccaagaatgacgatgacgatgatgaccagttagtttta
aatgtaaaatgtcattatctacaagctaagattgagggtaaggtctttgatcttggtgat
tgtgcaactgtgaagggtgaagaagggggccataatcatgttggtaggatacttgagttt
tttaaaacaaatgatggtgaagactatttccgagttcagtggttctttagagctgaagat
acggtaataaaggatgcagcagcatctaacaacaagaaacggttgttctactccacctta
atgaatgacaatccgttagattgcattgtctccaaagtgaaagtacttaaaaaaccacct
ggtgtaaatttgaagtctatttcgccatgtgatttttattatgacatgcaatacaacata
gattactccaccttttgtacaattaaaaatgacgtttcttcagatcatggcagtttgtcc
ccatcctacaacgaggaaatccatagtaatggagtcgtaaaccataattcgaatgaaact
atagctagtttagaacctcacaaattagagttgacactattagatttgtactccggctgt
ggtggaatgtcaacaggattgtgttttggagcaaagctatctggtgtagatctatccgct
aaatgggctgtagatgctaatagttgggcatgtgaaagcttaagattaaaccatccagag
acacaaattagaaatgaatctgctgaggactttcgtgaccttataaaggagtgggacaag
ctatgccaaaaatttgcggacaagaaggaggaaacacaaggtcaagatttcatgtgcact
ggatcacctgataacattataccctcaaaagctgacaatagggtgtccaaagatgaatat
gaagttgaaaaaatggttgatatctgttatagtgaacttggtggaactagcaagcgtgga
ctccaatttaaggtgcgctgggctggatatggtccaagtgatgatacatgggagccagtc
aagcagttaagcaattgtgaagaaaagatccgtgagtttgttcagaagggaatcaaggca
aaaatattgccacgtccgggtgatgttgatatcatatgtggtggtcctccatgccaagga
ataagtggttataaccgccatagaaactgggattctcctttggaagatgaaaagaattat
caaattgtagtcttcatggaaatcatcaaatttttgaggccaaaatacattttgatggaa
aatgttgtggatatattaaggtttgcaaatggttgccttggtagatatgcaataagtagc
ctggttggtgaatattatcaagtaaggctcgggataattgcagctggttgttatggtctt
ccccaattccgcttgcgtgtattcttgtggggtgctcatgctgatgagcatttgccacca
tttccacttcctactcatgatgtgatcttaaaatatgggcctccaattggatttgagcgt
aatgttgttgcttatgatgaagggggatcccggaaccttgagaagtgtgttcttcttgga
gatgccatatctgacctcccaccggtctcaaactctgaaagtcgtgatgtaatgaagtac
acaagtgctccagaaacggagttccaaaagtttattagagcttccaagtctgatatgttg
ggcattgctaccggaagttcttgtaaggtagagaagtctgtactacatgatcaccgccct
tttgaattaaatgaggatgaccatctacgagtttgccgtgtcccaaaaagaaagggagca
aattttagagatctcccaggtgttgtttctgatgatgataatgttgtaagcagaacacct
gacactgagctcatgccatctggaaaacattgggtccccgagtatgcaataaattttaat
gacgggaaaaacacaaaatcttttggacgtttgtggtgggatgagacggtttcaactgtg
ctatgtatgccaaattatcgttctgaggcaattttacatccagaacaagataggtgcctc
actattcgcgagaatgcaagattgcaagggtttcctgacttttatgcattatgtggcagc
gtgaaagaaagataccgtcaagtgggtaatgcagtggcagtcccagttggacgtgcatta
ggttatacactgggaatggcagtgcaaaagttgaccggaaatgagcctctcttgactctt
ccagcaaagtttgcacattctacaaccttagagctgctacatccctcattagcaaccaaa
cctgaagtcccttga
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