Erigeron canadensis (horseweed): 122611260
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Entry
122611260 CDS
T07610
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122611260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122611260
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122611260
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122611260
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122611260
BRCA1-C complex
122611260
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
Yop-YscD_cpl
DUF2614
Motif
Other DBs
NCBI-GeneID:
122611260
NCBI-ProteinID:
XP_043640191
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All DBs
Position
8:12042632..12050666
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AA seq
531 aa
AA seq
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MVWGLFPVDPLPGEESYYFFCKGTYKVGRKGCDIIVNKDKGVSRVHAEMVFDEMVSIDNT
KKKSCGIRIRDCSKYGTFVKKPVGSKEKVHEFPNKEMILDDEDLISFGTGNATYRFTYVP
LVFFICGLEPVQIKEVQVKILSIGTCMTTKWGPNCTHVLLGDNVSLNADVVDAVMSRKHF
ISYKWIEILADKRIGTQIPSCSSYAPTLTLQEVSVKVSEPESRENCLSGYTFLLESSDKY
KAKKKLQPLLESFGAKVDPAGEYIPHSQGLEDDENTVVHVISAGEGYRPEYSHNLSSVPK
VTEVNLICATLSGRIDPAVFVSPPVLVTSSCSTDETVVADSEPEVEITSMNTSSAIHKTE
PICLESIKHDSEGETASHIINTTKFDDQGNTTTYDTILKSKESQRDDKSLIQVRKTDDAD
LGTSTIIFSQDLIIRDTNLLSSVPSQTNNLVLNFKRFRKMGTESGNSLHNIVPFSKHPYK
GSEYENEEVAESLKEEKKRKQREAVAEDLFNKTKAKQRGAAGFLSGLFTGR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggccttttccccgtcgaccctcttccaggggaagaaagttattatttcttt
tgcaaagggacgtataaagtcggacgtaaaggatgtgatataattgttaacaaagataaa
ggagtttcgcgagtccatgcagaaatggtctttgatgagatggtttccattgacaatacg
aaaaagaaatcatgtggaattaggataagggattgctcaaagtacggaacttttgttaag
aagccagttgggtcaaaagaaaaagttcatgaatttccaaataaggagatgatattggat
gatgaagaccttatttcatttggaactggtaatgctacttacaggtttacttacgttcca
cttgtgttttttatttgtggcttggaacctgtccaaataaaagaagttcaagtgaagata
ttatccataggtacttgtatgactacaaaatggggcccaaactgcactcatgttcttctt
ggtgataatgtgtcactaaatgctgatgtagttgatgctgtaatgtccagaaagcatttt
atcagttataaatggattgagatacttgcagataaacgtattggcactcaaattcccagc
tgcagttcctatgctcctaccttgactttgcaagaagtctctgttaaagtttcggagcct
gagtctcgagaaaattgtttaagtgggtacacttttctgctggagtcatcagacaagtat
aaagctaagaaaaagttgcagccgttactagaatcatttggtgcaaaagttgatcctgct
ggagaatacataccccacagccagggtttggaggatgatgaaaatacagttgtgcatgta
atctctgctggagagggatatcggcctgagtattcccataaccttagctctgtacctaaa
gtgactgaagtaaacttgatttgtgctactttatctgggcgtatagatcctgctgttttt
gtatcaccgcctgtactagtcacatcttcatgctccacagatgagacagtggtagcagat
tctgaaccagaagttgaaatcacatccatgaatacatcttctgcaattcacaaaacagag
cccatttgtttagaatccattaaacatgacagtgaaggggaaacagcttctcatataata
aatacaacaaagttcgatgatcaaggaaacacaactacttatgataccatattaaaatcg
aaagagagtcaaagagatgataaaagcttgatccaagtacgcaagactgatgatgcggac
cttgggacctcaactataattttcagccaagatttaatcatccgggataccaatttacta
tcctctgtgccttctcaaacaaataatctagttttgaacttcaaacgtttcagaaaaatg
gggactgaatcaggaaatagtcttcacaatattgtacctttttcaaagcatccatacaag
ggttctgagtacgagaatgaggaagtagcagagtctttgaaggaagaaaagaagcgtaaa
cagagggaggctgttgcagaggatctatttaataaaactaaggcaaagcaacgtggagca
gccggttttctctccggcctttttaccggaagatga
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