Erigeron canadensis (horseweed): 122611276
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Entry
122611276 CDS
T07610
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122611276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122611276
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122611276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
ABC_trans_N
AAA_16
AAA_29
AAA
AAA_28
RsgA_GTPase
TIP49
Motif
Other DBs
NCBI-GeneID:
122611276
NCBI-ProteinID:
XP_043640210
LinkDB
All DBs
Position
8:22481563..22490309
Genome browser
AA seq
1443 aa
AA seq
DB search
MMDSGEVYRVSSARVNSFSWRNSGRDFFSRSFHEEHDDEEALKWAAIERLPTNLRIQRGI
LTEEKGQPKEIDIKNLSLVDKMNLLERLVRIAEQDNEKFLLKLKERIDRVGLQLPTIEIR
FEHLNVDAEAYVGGRALPTIFNFVVNILEGSLNCLHFLPNRKKSLPILHDVSGIVKPGRM
TLLLGPPSSGKTTLLLALAGKLGSDLHVSGRVTYNGHEMNEFVPQRTSAYISQHDLHIGE
MTVRETLAFSARCQGVGANYEMLADLARREKEANIKPDPDLDVYMKAASLQGQKASVVTE
YVIKILGLEVCADTIVGDEMFRGISGGQKKRVTTGEMMVGPSRAFLMDEISTGLDSSTTF
QIVNSIRQSIHILQGTSVISLLQPAPETYDLFDDVILLSDGQVVYQGPRENVLEFFEYMG
FKCPERKAVADFLQEVTSKKDQEQYWVRTNEHYSFVTVQEFAQAFQLFHVGRRLGDELAV
PFDRSKSHPSALTKKKYGVSRKELLKACISREYLLMKRNSFVYIFKMTQLIFLATTSMTL
FLRTEMHKKTVLDGTVYMGALFFTLLTITFNGFSELGLSIIKLPVFYKQRDLLFYPAWIY
ALPTWVLKIPVTFVEVATWVIMSYYVVGYDSDVGRFFRQLLLLICVHQMASALFRFMAAL
GRNIIVANTFGSVSLLAILVLGGFVLSRDDIKSYWAWGYWLSPLMYGQTGLAVNELLGKS
WKQVLPNSTETVGVAVLKSRGLFAEPKWYWISVGALVGYVFLFNIFNVLALTYLNPFGTP
QAILSEETLAARNAIKSGDPIELSETKNEVQRSVSSRSMSSRVGTVVEGEKKKKRGMVLP
FVPLSLTFDEIRYAVDMPQEMKAQGVAEDQLELIKNVSGCFRPGVLTALMGISGAGKTTL
LDVLAGRKTGGYIQGTISISGYPKKQETFARIAGYCEQTDIHSPYVTVFESLQYSAWLRL
PPEVDSATREMFIEEVMELVELNTLSGALVGLPGVNGLSTEQRKRLTIAVELVANPSIIF
MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLLKRGGEEIYV
GPLGRHCSQLIKYFEDVDGVNKIKDGYNPATWMLEVTSGAQEAALGVDFAQIYKNSELYR
RNKELIHINSQPIPGSTDIHFRTQYSQSFWTQCIACLWKQNWSYWRNPPYTAVRFLFTTF
IAIMFGTIFWNMGSKREKKQDLFNAMGSMYAAVTFIGVQNAVSVQPVVSIERTVFYRERA
AGMYSAFPYAFGQVMIEIPYIFVQTIVYGIIVYAMIGYEWSVVKLFWHLFFMYFTLLYFT
FYGMMTVAVTPNHNIAAIISSAFFALWNLFSGFIIPRTRIPIWWRWYYYICPVAWTLYGL
VASQFGDMSDKLESGETVSDFINSYFGFEHAFVGYVAIIIVGFTVLFAFIFAYSIKAFNF
QTR
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagtggggaagtctatagagtcagcagtgcgcgtgtaaacagttttagctgg
aggaacagcggcagagatttcttttcgagatcttttcatgaagaacatgatgatgaagaa
gcgcttaaatgggctgcaatcgagagacttccaaccaatcttcgaatacaaagaggcata
ctcactgaagaaaagggtcaacccaaagaaatcgatataaagaacctgagtctggtggac
aaaatgaatttacttgagaggctcgttagaatagctgagcaagacaatgagaagttcttg
ttaaaacttaaggaacgaattgaccgagttggacttcaacttcccactatcgagatacgg
tttgagcatttgaatgttgatgcagaagcatatgttggtggcagagcattgcctactatt
ttcaactttgtagttaacatcttagaggggtccttaaattgtttgcattttcttcccaac
agaaagaaatcattgccaatccttcatgatgtgagtggaatcgtgaagcctggccgaatg
acattgctcttaggcccaccaagctctgggaaaacgacattgcttttagccttggctgga
aagcttgggtcagatttacatgtatccggaagagtgacctacaatggacatgaaatgaac
gaatttgttccacaacgtacgtctgcttacataagtcaacatgatttgcatatcggagaa
atgacagttagggaaacactagctttctctgccagatgccaaggagttggagcaaactat
gaaatgttggccgacctggcaaggagagaaaaagaagcaaacatcaagcctgatcccgat
cttgacgtctacatgaaagcagcatcactacaaggacaaaaagccagtgttgtcactgaa
tatgttatcaagattttaggtcttgaagtctgcgctgataccatagtaggagatgaaatg
ttcagaggtatttctggagggcaaaagaagcgagttacaactggtgaaatgatggttggg
ccgtcaagagcatttttaatggacgagatatctactggtttggatagttcaacaacgttc
caaatagtgaattcaattaggcaatcaattcatattcttcaaggaacgtctgttatctca
ctcctccaacccgcaccagaaacctacgacttatttgatgatgtgatacttctctcagat
ggacaagttgtctatcaaggtcctcgagaaaatgtgctagagttttttgagtacatgggt
ttcaaatgtcccgagagaaaagcagttgccgactttttacaagaagtaacctcaaagaaa
gaccaagagcaatattgggtcagaactaatgaacattacagttttgttacggtacaagaa
tttgcacaagcattccagttgttccatgtggggagaaggctaggagatgaacttgctgtt
ccatttgatagaagcaaaagccacccttccgctttgactaaaaaaaaatatggtgttagc
agaaaggaattgttgaaagcatgcatatctagagaatacttgctaatgaaacggaattct
ttcgtttatatattcaagatgacccagcttattttcttggcgactacatcaatgacatta
ttcctacgcaccgagatgcataagaaaacagtactggatggaacggtttacatgggtgct
ttgtttttcacattactaacgattacattcaatggattctcggagcttgggttgagcatt
attaaacttccagtgttctacaagcaaagagaccttcttttctatcctgcttggatatac
gcactacccacatgggtcctcaagataccagtcacgtttgttgaagttgcgacttgggta
atcatgtcttattatgtcgtagggtatgattcagatgttggaaggtttttcagacagttg
cttctgctcatatgtgttcatcagatggcttctgcactatttcgtttcatggcagcatta
ggacgaaatatcattgttgccaacacatttggctcagtctcacttcttgccattcttgtg
cttggtggattcgtcttatcacgtgatgacataaaaagctactgggcgtggggttactgg
ctttcacctctgatgtatgggcaaactggcttggctgtcaacgaactccttgggaagagt
tggaaacaggttttaccgaactccacagaaacagtaggtgttgctgtcctaaagtcccgt
ggactatttgcagaaccaaaatggtattggatctcagtaggtgctttagttggatatgtg
ttcctcttcaatatcttcaatgttttggctctcacatacctgaacccctttgggacgcct
caggcaattctgtctgaagaaacattggcggcaagaaatgctataaaatcaggagatcca
atcgagttatcagaaacaaaaaatgaagttcaaagaagtgtatcatcaaggtcaatgtca
tcaagagtaggcactgtagttgaaggagaaaaaaaaaagaagcgcgggatggttttacct
tttgttcccctttccctaacatttgatgaaatcagatatgcagtggatatgcctcaggaa
atgaaagcacaaggtgttgcggaagaccaactagaactaataaagaatgttagtggttgt
tttaggccgggagttctcacagctctaatgggaatcagtggtgctggaaagaccacttta
ttggatgtcttagccgggcgcaagacaggagggtacatacaggggacgatcagtatctct
ggttacccaaagaagcaagaaacatttgctcgcatagcaggatattgtgagcaaaccgac
atccactccccatatgtcacagtctttgagtccttgcaatattctgcatggctaaggtta
cctcctgaagttgattcagcaaccagagagatgtttattgaggaggtcatggagcttgtg
gaactcaatacacttagtggggcactggtgggattacctggtgtgaatgggctttcaact
gagcagcgaaagaggctgacaattgcagttgagctagtggcaaacccatctataattttt
atggatgaacccacatcaggattggatgcaagagcagctgcaatagtcatgagaacggtg
cgaaacacagttgacacaggtagaacagtggtttgcaccatacatcagccaagcatcgac
atctttgacgcttttgacgagctatttcttttgaaacgaggaggagaagaaatatatgtt
ggtccattaggccgtcattgttctcaactgatcaagtactttgaggatgtggatggagtg
aataagattaaagatggttacaatccagcaacttggatgttggaagtgacctctggagca
caagaagcagctttaggtgttgacttcgctcaaatttacaagaactcggaattatacagg
agaaataaggagttgatacacataaatagtcagcctatacctggttccactgatatacat
ttccgtactcaatattcacaatcattttggacacaatgtatagcatgtctatggaaacaa
aattggtcgtattggcgaaacccgccctacactgcagtcagattccttttcacgacattc
atagccataatgtttggcacaattttctggaatatgggttccaaaagggaaaagaaacaa
gatctttttaatgcaatgggttctatgtatgctgctgtaacatttattggggtacaaaat
gctgtttcagtacagcctgttgtttccattgagagaacagtcttttacagggaaagagct
gctgggatgtactcggctttcccatacgcctttggacaagttatgatcgagataccatac
atttttgttcaaacgattgtctatggcattattgtatacgcgatgattggatacgagtgg
tcggttgtgaagctattttggcatctcttctttatgtacttcacattgctgtacttcaca
ttttatgggatgatgaccgtagcagtcacccctaaccacaatatcgcagctataatctca
tctgctttttttgcattatggaacctattctcgggattcattattccacgcacgaggata
cccatttggtggagatggtactactacatctgccctgttgcttggacactatatggctta
gttgcttcacaatttggagatatgtcagacaaactagaatcaggggaaacggtttccgac
ttcatcaacagttactttgggtttgaacatgcctttgtaggttatgttgcaataatcatc
gttggatttactgtccttttcgcattcatttttgcatactccatcaaggcatttaacttc
caaacacggtaa
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