Erigeron canadensis (horseweed): 122611277
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Entry
122611277 CDS
T07610
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122611277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122611277
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122611277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_28
RsgA_GTPase
TIP49
Motif
Other DBs
NCBI-GeneID:
122611277
NCBI-ProteinID:
XP_043640211
LinkDB
All DBs
Position
8:22440493..22464565
Genome browser
AA seq
1424 aa
AA seq
DB search
MMDSGDVYRVSSINSSSWSGRVLFSKSCHAEYDDEEALKWAAIEKLPTNLRIQRGILTDE
KGQPKEIDIKKLRLVEKMNLVDRLVKIAEQDNEKFLLKLKERIDRVGLQLPTIEIRYEHL
NVDAEAYVGGRALPTIFNFVVNILEGSLNCLHFLPSRKKSLPILHDVSGIVKPGRMTLLL
GPPSSGKTTLLLALAGKLGSDLHVSGRVTYNGHEMNEFVPQRTSAYISQHDLHIGEMTVR
ETLAFSARCQGVGANYEMLADLARREKEANVKPDPDLDVYMKAASLQGQKASVVTEYVIK
ILGLEVCADTIVGDEMARGISGGQKKRVTTGEMMVGPSRAFLMDEISTGLDSSTTFQIVN
SIRQSIHILRGTSVISLLQPAPETYDLFDDVILLSDGQVVYQGPRENVLEFFEHMGFKCP
ERKAVADFLQEVTSKKDQEQYWVRTNEHYSFVTVQEFAQAFRLFHVGRRLGDELAVPFDR
TKSHPSALTRKKYGVSRKELLKACISREYLLMKRNSFVYIFKMIQLIFLASISMTLFLRT
EMHKKTVMDGTVYMGSLFYTLLTITFNGYSELAMSVSKLPVFYKQRDLLFFPAWIYAIPT
WILKIPVTIAEVAAWVIMTYYVIGFDSDVGRFFRQLLLLVCVQQMASALFRFIAALGRNI
IVATSFGSLALLAILVLGGFVLSRDDIKGYWVWGYWLSPLMYGQTGLAVNELLGKSWKQV
LPNSTETVGVAVLKSRGLFAEPKWYWISVGALVGYVFLFNIFNVLALTYLNSLGTPQAVL
SEETLAARNAIKSGDPIELSETKNEGQTEGNAKKKCGMVLPFVPLSLTFDEIRYAVDMPR
EMKAQGVVQDQLELLKNVSGCFRPGVLTALMGISGAGKTTLMDVLAGRKTGGYIHGTISI
SGYPKKQETFARIAGYCEQTDIHSPHVTVFESLQYSAWLRLPPEVDSATREMFIEEVMEL
VELNTLSGALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT
VRNTVDTGRTVVCTIHQPSIDIFDAFDELILLKSGGEEIYVGPLGRHCCQLIKYFEDIDG
VNKIKDGYNPATWMLEVTSGAQEAALGVDFAQVYKKSELYRRNKELIHVNGQPIPGSTDL
HFRTQYAQSFWTQCMACLWKQNWSYWRNPPYTAVRFFFTTFIGLMFGAIFWDMGSKREKK
QDLFNAMGSMYAAVMFIGMKNALSIQPVVSIERTVFYRERAAGMYSAFPYAFGQVMIEIP
YIFVQTIVYGIIVYAMIGFEWSTVKFFWHLFFMYFTLLYFTFFGMMTAAVTPNHNIAAII
SSAFFAIWNLFSGFIIPRTRIPIWWRWYYYICPVAWTLYGLLASQFGDMSDKLESGETVS
DFINSYFGFEHAFVGYVAMIIVGFTVLFGFIFAYSIKSYNFQTR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagtggggatgtatatagagttagcagtataaacagttctagctggagtggt
agagttctcttttcgaaatcttgtcacgcagaatatgatgatgaagaagcacttaaatgg
gctgctatcgaaaaacttccaaccaatcttcgaatacaaagaggcatactcactgatgaa
aagggtcaacccaaagaaatcgatataaagaaactgaggttggtggaaaaaatgaatcta
gttgataggcttgttaaaatagctgagcaagacaatgagaagttcttgttaaagcttaag
gaacggattgaccgagttggacttcaactccccactatcgagatccggtatgagcatttg
aatgttgatgcagaagcatatgttggtggcagagccttgcctactattttcaactttgta
gttaatatcttagagggatccttaaattgtttgcattttcttcccagcagaaagaaatca
ttgccaatccttcatgatgtgagtggaatcgtgaagcctggccgaatgacattgctctta
ggcccaccaagctctgggaaaacaacattgcttttagccttggccggaaagcttgggtca
gatttacatgtatctggaagagtgacctacaatggacatgaaatgaacgaatttgttcca
caacgtacatctgcttatataagtcaacatgatttgcatatcggagaaatgacagttaga
gaaacactagctttctctgccagatgccaaggagttggagcaaactatgaaatgttggcc
gacctggcaaggagagaaaaagaagcaaacgtcaagcctgatcccgatcttgatgtctac
atgaaagcggcatcactacaagggcaaaaagccagtgtcgtcactgaatatgttatcaag
attttaggccttgaagtctgtgctgacaccatagtaggagatgaaatggccagaggcatt
tctggaggccaaaaaaagcgagttacaactggtgaaatgatggttgggccatcaagagca
tttttaatggatgagatatctactggtttggatagttccacgacgttccaaatagtgaat
tcaattaggcaatcaattcatattcttcgaggaacgtctgtaatctcactcctccaaccg
gcaccagaaacctacgacttatttgatgatgtgattcttctctcagatggacaagttgtc
tatcaaggtccccgagaaaatgtgctggagttttttgagcacatgggtttcaaatgtcct
gagagaaaagcagttgccgactttttacaagaagtaacatcaaagaaagatcaggagcaa
tattgggtcagaactaatgaacattacagttttgttacggtacaagaattcgcacaagca
tttaggttgttccatgtaggaagaagactaggtgatgaacttgctgttccatttgacaga
accaaaagccacccttctgctttgactagaaagaaatatggtgttagcagaaaggaattg
ttgaaagcatgcatatctagagagtacttgcttatgaaacggaattctttcgtttatata
ttcaagatgatacagcttattttcttggcgagtatatcgatgacattatttctacgcact
gagatgcataagaaaacagtaatggatggaacggtttacatgggttctttgttttacaca
ttactcacaattactttcaatggatactcagagcttgcaatgagtgttagtaaacttcca
gtgttctacaagcaacgagaccttctattttttcctgcttggatatacgcaataccgaca
tggatcctcaagataccagtcacaattgctgaagttgctgcctgggtaatcatgacgtat
tatgtcatagggtttgattcagatgtcggaaggtttttcagacaattgcttctgcttgta
tgtgttcagcagatggcttctgcactctttcgtttcatagcagcattaggacgaaatatc
attgtcgccacctcatttggctcactcgcccttcttgccattcttgtgctaggtggattt
gtcttgtcacgggatgatataaaaggctactgggtgtggggttactggctttcacctctg
atgtatgggcagactggcttggctgtcaatgaactccttgggaagagttggaaacaggtt
ttaccgaactccacagaaacagtaggtgttgctgtcctaaagtcccgtggactatttgca
gaaccaaaatggtattggatctcagtaggtgctttagttggatatgtgttcctcttcaat
atcttcaacgttttggctctcacatacctgaactcattagggacaccacaggcagttctg
tccgaagaaacgttggcggcaagaaatgctataaaatcaggagatccaatcgaattatca
gaaacgaaaaatgaaggtcaaacagaaggcaacgcgaaaaagaagtgtgggatggtttta
ccttttgtgcccctttccctaacatttgatgaaatcagatatgcagtggatatgcctcgg
gaaatgaaagcacaaggtgttgtgcaggaccaactagaactattaaagaatgttagtggt
tgttttaggccaggagttctcacagctctaatggggatcagtggtgctggaaagacaact
ttaatggatgtcttagcgggacgcaaaacaggagggtacatacacggaacaatcagtatc
tctgggtacccaaagaagcaagaaacgtttgctcgcattgcaggatattgtgagcaaact
gatatccactccccacatgtcactgtctttgagtccttgcaatattctgcatggctacgg
ttaccacctgaggttgattcagcaaccagagagatgtttattgaggaggtcatggagctt
gtggagctaaatacactgagtggagcactggtgggattacctggtgtaaatgggctttca
attgagcagcgcaagaggctgacaatcgcagttgagctagtggcaaacccatctataatt
tttatggatgagcccacatcaggattggatgcaagggcagctgcaatagtcatgagaacg
gtgagaaacacagttgatacaggtcgaacagtggtatgcaccatacatcagccaagcatc
gacatctttgatgcttttgacgagctaattctactcaaaagtggaggagaagagatatat
gttggtccattaggccgtcattgttgtcaattgatcaagtattttgaggatattgatgga
gtgaataaaataaaagatggttacaatccggcaacttggatgttggaagtgacctctgga
gcacaggaagcagctttgggtgttgactttgctcaagtatacaagaagtcggaactatac
aggagaaataaggagttgatacacgtaaatggtcagcctatacctggttccactgattta
catttccgtactcaatatgcacagtctttttggacacaatgtatggcatgtctatggaaa
caaaattggtcatattggcgaaacccgccctacactgcagtcagattcttcttcacaacg
ttcattgggttaatgtttggcgcaattttctgggatatgggttccaaaagggaaaagaaa
caagatctttttaatgcaatgggttcaatgtatgctgctgtaatgtttattggaatgaaa
aacgcactttccatacaacctgttgtttctattgagagaacagtcttttacagggaaagg
gctgctgggatgtactctgcttttccatacgcctttggacaagttatgattgagatacca
tacatttttgttcaaacgattgtgtatggcattattgtatacgcaatgattggattcgag
tggtcgactgtgaagttcttttggcatctcttctttatgtacttcacgttactgtacttc
acattttttggaatgatgacagcagcagtcacccctaaccacaacatcgctgctataatc
tcgtctgccttttttgcaatatggaacctattctcgggattcattattccacggacaagg
atacccatatggtggaggtggtactactatatctgccctgttgcttggacactctatgga
ttacttgcttcacaatttggagatatgtcagacaaactagaatcaggagaaacagtttcc
gacttcatcaacagttactttgggtttgaacatgcctttgtaggttatgttgcaatgatc
attgttggatttaccgtcctcttcggattcatttttgcgtactctatcaagtcatataac
ttccaaacacggtaa
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