Erigeron canadensis (horseweed): 122611314 Help Entry 122611314         CDS       T07610                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism ecad  Erigeron canadensis (horseweed) Pathway ecad04142   Lysosome biogenesis ecad04145   Phagocytosis ecad04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ecad00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     122611314    04142 Lysosome biogenesis     122611314    04148 Efferocytosis     122611314  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ecad04131]     122611314 Membrane trafficking [BR:ecad04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     122611314    Hops complex     122611314 SSDB OrthologParalogGFIT Motif Pfam:  Pep3_Vps18 VPS18_solenoid_2nd VPS18_solenoid_1st VPS18_RING_C Clathrin zf-RING_Vps41 zf-RING_11 zf_RING_Vps8 zf-rbx1 zf_RING_Vps8_fungal zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-RING_2 Nup54_57_C Motif Other DBs NCBI-GeneID:  122611314 NCBI-ProteinID:  XP_043640258 LinkDB All DBs Position 8:42260550..42268732 Genome browser AA seq 983 aa AA seqDB search MEYRRQVFSVDLLERYAAKGHGVITCMASGNDVIVLGTSTGWLIRHDFGVGDSYDVDLSS GRGDQSIHSIFVDPGGSHCIATVVGNGASDTYYMHAKWSKPRVLSALRGRVVNTVAWNRQ QITEASTREVILGTENGQLYELFVDEKDKREKYVKFLFELSELPEAFKGLQMETATLNIG TRYYVMAVTPTRLYSFTGIGSLETIFASYVERAVHFMELPGEIPNSELHFFIKQRRAVHF AWLSGAGIYHGGLNFGAQNRSPNGDENFVENKALLDYSKLSDGGEVVKPSSIALSEFHFL LLIGNRVKVVNRISEQIVEELQFDQTSESASKGIIGLSIDASAGLFYAYDENSIFQVSVT DEGRDMWKVYLDLKEYAAALVNCSDSFQRDQVYLEQAEAAFSARDFFRAASFFAKINYAL SFEEITLKFISIGEQDALRTFLLRKLDNLVKDDKCQIMMISTWATELYLDKINRLLLEDD SPENRNSEYQSIIMEFRAFLSDSKDVLDEATTMKLLESYGRVDELVYFASLKEQHEIVVH HYIQQGEAKRALNVLQKPSVSVDLQYKFAPDLIMLDAYETVESWMTRKDLNPRKLIPAMM SYSSEPHAKNETHEVIKYLEFCVHRLQNEDPGVHNLLLSLYAKKEDDSALLRFLQCKFGK GRSSGPDFFYDPKYALRLCLKEKRMRACVHIYSMMFMHEEAVALALQVDPELAMAEADKV EDDEDLRKKLWLMVAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALID DFKEAICSSLEDYNQQIEKLKEEMNDATHGADNIRNDISALAQRYTVVDRDEECGVCRRV ILAAGADYQRARGYTTIGPMAPFYVFPCGHAFHAQCLVAHVTKCTDQNQAEYILDLQKQL TLMSVEPKESVNGGDDSIGSVAPVDKIRSQLDDAIASECPFCGDLMISEISRPFVLPEES YLVSSWEIMSKNVGSEKGISFVV NT seq 2952 nt NT seq  +upstreamnt  +downstreamnt atggaatatagaaggcaagtattttctgtagatcttctagagagatatgcagcaaaaggt catggagttattacctgtatggcatctggaaacgatgtcattgttctaggaactagtact ggatggctaatcaggcatgactttggtgttggtgattcttacgatgtcgatctctcttct ggtcgcggagaccaatccatccacagcatttttgttgatcctggtgggagtcattgtatt gccaccgttgtcggcaatggcgcttcggatacttattatatgcatgcaaaatggtcaaag cccagagtgctgtccgcactgagaggccgtgtggtcaatactgttgcctggaatagacaa cagataacagaagcttctacacgagaagttattcttggtacagaaaatggccaactgtat gaactttttgttgatgagaaagataagagggagaaatacgtaaagtttttatttgagcta tctgaattaccagaagctttcaaggggttacagatggaaacagctaccttgaacattgga actagatactacgtgatggcagtaactccaactaggctttattcgtttactggcattgga tctcttgagactatctttgccagttatgtagagcgtgctgtgcattttatggagcttcct ggagaaataccaaatagtgagctgcacttcttcattaaacaaagaagagcagtgcatttc gcttggctttctggagctggtatctatcacggcggcctgaattttggtgcacaaaacagg tcaccaaatggagatgagaattttgtggagaacaaggctcttttagactattcgaagtta agtgatggtggcgaagtagttaaaccaagttctattgcactctcagaatttcactttttg cttctaattgggaacagggtgaaggttgtaaacagaattagtgaacaaattgtagaagaa cttcagtttgatcaaacatcagagtcggcatcaaaaggaatcattggcctatccattgat gcatctgctgggctgttctatgcatatgatgaaaactcaatctttcaggtttctgtcact gatgaaggccgagatatgtggaaagtgtacctggacctaaaggaatacgccgctgctttg gtaaattgttctgattcatttcagagagaccaagtatacttagaacaggctgaagctgct ttttctgctagagacttcttcagagccgcatcattttttgctaaaatcaattatgcattg tcatttgaagagatcacactgaagtttataagcataggagaacaggatgccttaaggacg tttttgctacggaagcttgataatctcgtgaaagatgacaagtgtcaaataatgatgata tctacatgggccaccgaattgtatcttgacaagatcaatagattactgctggaggatgac tcaccagagaaccgtaattcagaataccagtctatcattatggaatttcgtgcttttctt agtgacagtaaagatgtgctggatgaggcaactactatgaagctacttgaaagctatggt agagttgatgaattagtatattttgctagtctaaaggaacaacacgaaattgtggtccat cactacattcagcaaggagaagcaaagagagccttgaacgtacttcaaaagcccagtgtt tctgttgatttacagtataagtttgctccagatctcatcatgcttgatgcatatgaaact gtcgagtcatggatgaccaggaaagatttgaatccaagaaagctgattcctgcaatgatg tcgtattctagtgagccccatgcaaagaatgaaacccatgaagtgatcaagtatttagaa ttttgtgttcatcggctccagaatgaagatccaggtgttcataacctcttgctctctctg tatgcaaagaaggaagacgatagtgcccttttgcggtttctacaatgcaagttcgggaaa ggacgttctagtggccctgatttcttttatgatcccaagtacgccttgcgtctttgtctc aaggaaaagcgcatgcgtgcatgtgttcatatctacagcatgatgtttatgcatgaagaa gctgttgcacttgctcttcaggttgatcctgagcttgcaatggctgaagcagacaaagtg gaggatgatgaagacttgaggaagaagctatggcttatggtcgccaaacacgttgttgag caggaaaagggtacgaaaagagagaacattaggaaggcaattgcatttctcaaggaaact gatggtctgttaaagattgaagatatcttacctttctttccagactttgcactaattgat gacttcaaggaagcaatatgttcatctttagaggattacaaccagcagattgaaaaattg aaagaggagatgaatgatgcaacacatggtgctgataatataagaaatgatattagcgct cttgctcagagatatacagtcgttgatcgtgatgaggaatgcggggtttgcaggcgggta attttggctgctggtgcagattatcaaagggcaaggggttatacaacaatagggccaatg gcccctttctacgtgttcccatgcgggcatgcgtttcatgcacaatgtcttgttgcacat gttactaaatgcactgaccaaaatcaagcggagtatatactggatcttcagaaacaactc actttaatgagtgttgaaccaaaggagagtgtaaatggtggcgacgactcaatcggaagt gtggctccagttgacaagattcggtcacagttagatgatgccatagcgagtgaatgtcca ttttgtggggatctgatgataagtgagatatcaaggccatttgttttgcccgaggaatca tatctagtatcttcatgggagatcatgtcaaagaatgttggaagtgagaaaggcatttca tttgttgtctag

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