Erigeron canadensis (horseweed): 122611368
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Entry
122611368 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122611368
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122611368
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122611368
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122611368
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122611368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
122611368
NCBI-ProteinID:
XP_043640325
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All DBs
Position
8:complement(47111823..47115685)
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AA seq
702 aa
AA seq
DB search
MDSSNSNFPKNPQNSETLISRPNKIDVHATAHKLFDEISQPEGESLMSEQVLPEDSTTHQ
PQLLSPSITGNGVNNNNNNNYNNNEEEEEDEDFDDDNLNTDDETEAWISCNQNESVETYK
PFPSVASTSSGWYEDVYDKPFMVGAGLANLGNTCFFNAVLQCFTHSVLLIQGLYLYSHPT
PCDCSNERFCLVCALREHVERSLSSNGRIVSPWKFIDNLNYFSSSFQRYQQEDAHEFLQC
FLDRLDSSLSNLKLKDATLPSQNDNLVKQVFGGRVISKLRCCNCNHISDTYEPSVDLSLE
IEDANSLSTALESFTKVEHIEDEEMKFTCDQCKQKVSVEKQLMLDQTPPIFAFHLKRFKN
DGSYVEKIEKHVEFPLELDVLPYTCGNQNDSGELKYELYAVVVHVAYTSSFGHYYCYIRS
APDTWYKFDDSKVTRVSEADVLSDQAYILFYAKQDTTWFSKYMETYKPSLDYLSNTSPKS
VLENVDPSNICSHDVNASRDHPSQSDAVVPLKPIINVIKTSPLNLKEYGSNHRLEAQKSA
TVTSTRADEIRGTNLEVGSNGGSSTPFLKPNDLKTKIDIDQMLSPSTPPRSPGLNLLDDE
PSGVVFAAKPEQLKLVEKSFNKRQRNKEVEDKSRSEAVRQCKRMPGSRGSQFMAVIEEPL
KSADSLKKKSKKMASPPRKSYSKSNERFKHYGNVINPASSFR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatagtagtaatagtaatttcccaaaaaacccccaaaattcagaaaccctaatttca
cgcccaaataaaattgatgttcacgctactgcacacaagttgtttgatgaaatatctcaa
cctgaaggagaaagtttgatgtcagaacaagttcttccagaagattctactactcaccaa
ccacagttgctatctccgtctattacaggtaacggtgttaataataataataacaataat
tataataacaatgaagaagaagaagaagatgaggattttgatgatgataatttaaatact
gatgatgaaacggaggcgtggatttcgtgtaatcaaaatgaatcggtggagacttataaa
ccgtttccgtcggttgcgtcgacttcttccggttggtatgaagacgtctacgacaagcct
tttatggtgggtgcagggctggctaatctggggaatacttgctttttcaatgcagttttg
cagtgcttcacccactctgtgttacttattcagggtctttatctgtacagtcatccgaca
ccctgcgattgtagcaatgaacgattctgcttggtatgtgctttgcgtgaacatgttgaa
cgttcgttatcatcaaatggaagaattgtctctccttggaaatttattgacaatttgaat
tatttttcatcatcgtttcaaagatatcaacaggaagatgctcatgagttcttgcagtgt
tttctggatagactcgatagttctttgagtaatttaaaactgaaggatgctactcttcca
tcacaaaatgacaatctagtcaagcaagtatttggaggacgggttattagcaaactgagg
tgttgcaactgcaaccacatatctgacacatacgagccatcagttgaccttagcttggag
attgaagatgcaaacagtctgtcaactgcccttgaatcattcacgaaagttgaacacatc
gaagatgaagagatgaagtttacatgtgaccaatgtaaacaaaaggtgtctgttgagaaa
caacttatgctggatcaaactcctccaatctttgcttttcatttaaaaagattcaaaaat
gatggctcttatgtggaaaagatagaaaaacatgtggagtttcctcttgagttagatgtg
ctgccttacacatgtggtaaccagaatgatagtggggaattaaaatatgaactatatgca
gttgttgtacatgtggcctatacatctagctttggtcattattattgttacattcgttct
gcacctgatacatggtataagtttgatgactcaaaggttacccgagtttcagaagctgac
gtgttgtctgatcaagcatacattttgttctatgcaaaacaagacacaacttggttctca
aagtatatggaaacatataaaccttcattggattacttatcaaacacttcccccaaatca
gtactggagaatgttgatccatcaaatatttgttctcatgatgtcaatgcatctagagac
catccttctcaatctgatgctgtggtgcccctcaaaccaatcatcaatgtaatcaaaaca
tccccattaaaccttaaagagtatggctctaaccacaggcttgaagctcagaagagtgca
actgtgacatccacaagggctgacgagattaggggtactaatctcgaagttggatcaaat
gggggttcttctacgccttttctaaaaccaaatgatttgaaaaccaaaattgacattgat
caaatgctttctccatcaacaccacccagatctcctggacttaatttgttagacgatgag
ccgtcaggagtggtttttgctgcaaagcctgaacagttgaaacttgtggaaaaatcattc
aataagaggcaaagaaacaaggaagttgaggataaatcaaggagcgaggcggtaagacaa
tgtaaaaggatgcctggttcaaggggaagccaattcatggctgtcattgaagagccatta
aaaagtgcagactcgctgaaaaagaaaagcaagaaaatggcatcacctccaagaaaaagc
tatagcaaatcaaacgaacgctttaagcattatggcaatgtaatcaaccctgcttcaagt
tttcgctga
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