Erigeron canadensis (horseweed): 122611375
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Entry
122611375 CDS
T07610
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122611375
04120 Ubiquitin mediated proteolysis
122611375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122611375
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
122611375
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122611375
NCBI-ProteinID:
XP_043640334
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Position
8:complement(45633360..45639401)
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AA seq
745 aa
AA seq
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MDDVKKMIEFEEGWGYVQKGITKLKKILADPTEPQFSSEEYIMQYTKIYNMCTQKPPYDY
SQQLYDRYKICLTEYLKATVLPSLKEKHDEFMLKELLIRWSNHKIMTRWLSRFFHYLDRY
FIQRRSLPTLKEVGLTCFRDLVYKALKVKVKVKLVVITLIDREREGQQIDRSLLKNILDI
FVEMGMGKMECYENDFENPMLKDTSAYYSRKASNWIQEYSCPEYMLQAEDCLKKEKERVS
HYLQSSSEPKLLEKVRHELLTAHSTDLFEKKDSGVYALLRDDKIDDLSRMHRLFVTIPHG
LEPVSTMFMKHVTAEGTALVNQAEDAANNKTAEKRDVAGMQEQVFYRKVIDLHDKCMVYV
VDCFANQTLFHKALKEAFEIFCNKSISGSSSAELLANFCDNILKKGGTEKLSDEGIEDKL
EKIVKLLAYISDKDLFIEFCRKKLARRLLFDRSTSDEHERSILAKLKEQWGVQFTGKMQG
MITDLALAKENQSQYEEYVRNDPTVKPGIDLSVTVLTTGFWPNYKSSELVLPLEMAKCVE
AFKKFYDTNTKSRRLTWIYSLGTCNVNGKFDPKTVELIVTTFQASVLLLFNTSTRRSYED
IKTELKLSDDDLVRILHSLSCAKYKILIKEPNTKTISSIDYFEFNSKFTDRMRRIKIPLP
PVDEKKKVIEDVDKDRKFAIDAALVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKVIKR
RIEDLISREYLERDKDNASMFHYLA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgttaaaaagatgatagagtttgaggaaggatgggggtacgttcagaagggc
ataacgaagttgaagaagattttagctgatcctacggagccacaattcagctccgaggaa
tatataatgcaatacacaaaaatttacaacatgtgcactcaaaaaccaccgtatgattac
tctcagcagctgtatgacagatataagatttgtttgacagaataccttaaagcaacggtt
ttaccatctctgaaagaaaagcatgatgagttcatgctaaaagagctactgatcagatgg
tcaaatcataaaatcatgacgagatggctttcccgattcttccactatcttgatcgctac
ttcatccaacgccgatcccttcctacattaaaagaagttggtctcacatgttttcgtgat
ctggtctacaaagcgctgaaagtgaaagtgaaagtgaagcttgtggtgataacactgatt
gatcgagagcgtgaaggccagcaaatagatcgatctttactgaagaatatcttagacata
tttgttgaaatgggaatggggaaaatggaatgttatgagaacgactttgaaaaccccatg
cttaaagatacatcagcgtattattcacgaaaagcttcaaattggattcaagaatattct
tgtccagagtatatgcttcaagctgaagattgcttaaaaaaagaaaaggaaagagtatct
cattatcttcaatctagtagtgagccaaagctgctcgagaaagttcggcatgagctgtta
acggctcactctaccgacttattcgagaaaaaagactctggtgtttatgcactgctgagg
gatgacaagattgatgacctatcaaggatgcacagacttttcgtaacaataccccatgga
ttggaacctgtgtctactatgtttatgaagcatgttacagctgaaggcacagccttggtc
aaccaggcagaagatgctgcaaataataagacggcagaaaagagagatgtggctggaatg
caggaacaagtcttttacaggaaagtgatcgacttacatgacaagtgcatggtgtatgta
gttgattgttttgcgaaccagaccctttttcacaaggcgctcaaagaagcatttgaaata
ttctgcaacaagagtatatctggaagttcaagtgcagagttacttgccaacttttgtgat
aatattcttaaaaaaggtggaactgagaaactgagtgatgaaggcattgaggacaaactt
gagaagatagtgaagctgcttgcatacatcagcgataaggatctctttattgagttctgc
aggaaaaagcttgctcggaggcttttgtttgataggagtaccagcgatgagcatgagagg
agtattcttgcaaaactgaaagagcagtggggtgttcagtttaccggaaagatgcaagga
atgattacagatttagctttggcaaaggagaatcaatcccaatatgaagagtacgtaaga
aatgatcctactgtcaaacccgggattgacttgtctgtaactgtgctgactactggtttc
tggccgaattacaaatcgtccgaacttgttctcccattagaaatggccaagtgtgttgaa
gctttcaaaaagttttatgatacaaacacgaaaagtaggagacttacgtggatatattcg
ttgggtacctgcaacgtcaatgggaaatttgatccaaaaactgtggagctgattgtgact
acctttcaggcatctgttcttcttttattcaatacctctacccggaggagttatgaggac
atcaagactgaactcaagttgtcagacgatgatctagtccggattctccactcgctgtca
tgtgcaaaatataagatccttatcaaggagccaaataccaaaacaatatcttccattgat
tactttgaatttaactcaaagtttacagatagaatgaggaggatcaagattcctctacct
ccagtagatgagaagaaaaaggtgattgaggatgttgacaaggataggaagtttgcaatt
gatgcagcacttgttcgcatcatgaagagcagaaaagtcctggggtaccagcagctggtt
atggagtgtgttgaacaattgggacggatgtttaagcctgatgtaaaagtaataaagagg
aggatcgaagatctgattagccgagagtatcttgagagagacaaagataatgcaagcatg
ttccactacttggcatga
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