Erigeron canadensis (horseweed): 54108549
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Entry
54108549 CDS
T07610
Symbol
rbcL, HGF93_pgp060
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00630
Glyoxylate and dicarboxylate metabolism
ecad00710
Carbon fixation by Calvin cycle
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01200
Carbon metabolism
Module
ecad_M00165
Reductive pentose phosphate cycle (Calvin cycle)
ecad_M00532
Photorespiration
ecad_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
54108549 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
54108549 (rbcL)
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
54108549 (rbcL)
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
54108549
NCBI-ProteinID:
YP_009747324
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Position
Pltd:54576..56033
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AA seq
485 aa
AA seq
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MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
NATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLATEGNEIIREATKWSPELAAACEVWKEIKFEFQAMDTLDDDKD
KDKKR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgttaaagattat
aaattgacttattatactcctgaatatgaaaccaaggatactgatatcttggcagcattt
cgagtaactcctcaacctggagttccgcctgaagaagcaggggccgcagtagctgccgaa
tcttctactggtacatggacaactgtgtggaccgatggacttacgagccttgatcgttac
aaagggcgatgctatggaatcgagcctgttcctggagaagaaaatcaatttattgcttat
gtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttccatc
gtaggtaatgtatttgggttcaaagccctgcgtgctctacgtctggaagatttgcgaatc
cctactgcgtatgttaaaactttccaaggtccgcctcacggcatccaagttgagagagat
aaattgaacaagtatggtcgtcccctgttgggctgtactattaaacctaaattggggtta
tccgctaaaaactacggtagagctgtttatgaatgtcttcgtggtggccttgattttact
aaagatgatgagaacgtgaactcccaaccatttatgcgttggagagaccgtttcttattt
tgtgccgaagctatttataaatcacaagctgaaacaggtgaaatcaaagggcattacttg
aatgctactgcgggtacatgcgaagatatgatgaaaagggctgtatttgccagagaattg
ggagttcctattgtaatgcatgactacctaacagggggattcactgcaaatactaccttg
gctcattattgccgagataatggcctacttcttcacatccaccgtgcaatgcatgcagtt
attgatagacagaagaatcatggtatgcactttcgtgtactagctaaagccttacgtatg
tctggtggagatcatattcattccggtaccgtagtaggtaaactagaaggggaaagagag
atcactttgggctttgttgatttactgcgtgatgattttattgaaaaagatagaagtcgc
ggtatttatttcacccaagattgggtctctctaccaggtgttctgccggtagcttcgggg
ggtattcacgtttggcatatgcctgctctgaccgagatctttggggatgattctgtacta
cagtttggtggcggaactttagggcacccttggggaaatgcacctggtgccgtagctaat
cgagtagctctagaagcatgtgtacaagctcgtaacgagggacgcgatcttgctactgag
ggtaatgaaattatccgtgaggctaccaaatggagtcctgaactagctgctgcttgtgaa
gtatggaaggagatcaaatttgagtttcaggcaatggatactttggatgacgataaggat
aaagataagaagagataa
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