Enterobacter cancerogenus: CWI88_01185
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Entry
CWI88_01185 CDS
T05545
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CWI88_01185 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecan03021
]
CWI88_01185 (rpoC)
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_01185 (rpoC)
Enzymes [BR:
ecan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CWI88_01185 (rpoC)
Transcription machinery [BR:
ecan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CWI88_01185 (rpoC)
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CWI88_01185 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AUJ79739
UniProt:
A0AAN2ATS7
LinkDB
All DBs
Position
234896..239119
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERHQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSSGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI
VDGQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSDFLEGEQVEYSRVKIANRDLEANGKIGATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatttattaaagtttctgaaagcgcagactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaagcctgagcgtgacggccttttctgtgcacgt
attttcgggccagtaaaagactacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgttgaagtgacccagaccaaagtgcgtcgtgag
cgcatgggccacatcgagctggcgtctccaacggcgcacatttggttcctgaaatctctg
ccgtcccgtatcggtctgctgctggatatgccgctgcgcgatatcgaacgtgttctgtac
ttcgaatcttatgtggttatcgaaggcgggatgacgaacctggaacgtcaccagattctg
accgaagaacagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctattcaggccctgctgaagagcatggatctggagcaagagtgcgagcag
ctgcgtgaagagctgaacgaaactaactccgaaaccaaacgtaaaaagctgaccaagcgt
atcaaactgctggaagcgttcgttcagtctggtaacaagccagagtggatgatcctgacc
gttctgccggttctgccgccagacctgcgtccactggttccgcttgatggtggtcgtttc
gcgacgtctgacctgaacgatctgtatcgtcgcgtcattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgcctgacatcatcgtacgtaacgaaaaacgtatgctgcag
gaagcggtcgatgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgtggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggagctgcgtggcctcgccaccaccatcaaagccgctaagaaaatg
gttgagcgtgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg
gtactgctgaaccgtgcaccaaccctgcaccgtctgggtatccaggcatttgagccagta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcctataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccagcgaacggtgagccaatcatc
gttccttctcaggacgttgtattgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgaatatgaaaaagatgaaaac
ggcgaattcgttgcgaaaaccagcctgaaagacacgaccgttggccgtgcgattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaagcg
atctccaaaatgctgaacacctgttaccgcattttgggtctgaagccgaccgttatcttc
gctgaccagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcctctgttggt
atcgatgacatggtcatcccagagaagaaacacgagatcatctctgaagcggaagccgaa
gttgctgagatccaggagcagttccagtctggtctggtcaccgcgggcgaacgctataac
aaagttatcgatatctgggcagcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggcgtcgaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcagcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccagatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttatctgacgcgtcgtctg
gttgacgttgcacaggatctggttgtgactgaagacgattgtggcaccctcgaaggtatc
accatgaccccggttatcgagggtggtgatgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgttaccgcggaagacattctgaagccgggtaccgcagacattctggttccacgc
aacacgctgctgcacgagcactggtgtgacctgctggaagcgaactctgttgactccgtg
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtatgtgcacactgctatggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagcaatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtctgttgttaactcttcaggcaagctggttgtcacctcacgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggt
gcggttatggcgaaaggtgatggcgagcaggttgctggcggtgaaaccgttgcaaactgg
gatccacacaccatgccggttatcaccgaagtaagtggtttcatccgcttcactgacatg
atcgacggccagaccattactcgtcagaccgacgaactgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactgccggtggtaaagatctgcgtcctgcactgaaaatc
gttgatggtcagggtaacgacgttctgatccctggtaccgatatgcctgcgcagtacttc
ctgccgggtaaagcgattgtacagctggaagatggcgtacagatcagttctggtgacacc
ctggcgcgtattcctcaggaatccggcggtaccaaggacatcaccggtggtctgccacgc
gttgcggatctgtttgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggtatcatttccttcggtaaagagaccaaagggaaacgtcgtctggttatcaccccggta
gatggcagcgagccgtacgaagagatgattccaaaatggcgtcagctcaacgtgtttgaa
ggtgaacgtgtagaacgtggtgatgtggtttccgatggtccagaagctccacacgacatt
ctgcgtcttcgtggcgtacacgcggtaacgcgttacatcaccaacgaagtacaggacgtt
taccgtctgcaaggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagcaaccatcgaaaacgcaggcagctccgacttcctggaaggcgagcaggtt
gaatactctcgcgttaagatcgctaaccgcgatctggaagcgaacggcaaaatcggtgcg
accttctcacgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tctgcagcatcgttccaggaaaccacgcgtgtcctgaccgaagcggctgttgcgggtaaa
cgtgatgaactgcgcggtctgaaagagaacgttatcgtgggtcgtctgatcccggccggt
accggttatgcgtaccaccaggatcgtatgcgtcgtcgtgcggcaggcgaactgccagct
gcaccgcaggttactgcagaagatgcatccgcgagcctggcagaactgctgaacgcaggt
ctgggtggttctgacaacgagtaa
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integrated database retrieval system
