Enterobacter cancerogenus: CWI88_02650
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Entry
CWI88_02650 CDS
T05545
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI88_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecan03019
]
CWI88_02650
03009 Ribosome biogenesis [BR:
ecan03009
]
CWI88_02650
Enzymes [BR:
ecan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWI88_02650
Messenger RNA biogenesis [BR:
ecan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWI88_02650
Ribosome biogenesis [BR:
ecan03009
]
Prokaryotic type
rRNA helicases
CWI88_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUJ80007
UniProt:
A0AB38P3L6
LinkDB
All DBs
Position
540137..542026
Genome browser
AA seq
629 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLHNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPTAEGEELD
IETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRTDRGGERRGGGRSFGGERREGGRSEGR
GGEGRRFSGERRENRGPRRDEGASRRRDA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaccgatctgggttacgaaaaaccatctccgatccaggcagaatgtattccgcatctg
ctctctggtcgtgacgtgctgggcatggcccagacgggtagcggtaaaaccgcagcattc
tcgctgccgctgctgcacaacattgatccggacctgcgtgcaccgcagatcctcgtcctt
gctccaacccgtgaactggctgttcaggttgctgaagcgatgactgaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggtccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtacccttgatctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgtagaaaccattatggcgcagatcccggaaggt
catcagaccgctctgttctctgccaccatgccagaagctatccgtcgtattacccgccgc
ttcatgaaagagccgcaggaagtacgcattcagtccagcgttaccactcgcccggacatc
agccagagctactggtctgtatacggcatgcgtaaaaacgaagcgctggttcgtttcctg
gaagcagaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggaacgtagcggctacaacagcgcagcgctgaacggtgatatgaac
caggccctgcgtgagcagactctggagcgcttgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgaacgtatcagcctggttgtaaactac
gacatcccgatggactctgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagctgagctgccaaacgcagagctgctgggc
aaacgccgcctggaaaaattcgccgccaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcgcagatccagcctaccgctgaaggcgaagagctggat
atcgaaaccctggctgcagcactgctgaaaatggcacagggcgaacgtaccctgatcgtt
ccgccagatgcgcctatgcgtcctaagcgtgagttccgtgaccgtgacgaccgtttcgaa
cgtcgtggcgaccgtaacgaccgtggcccacgtggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgtgagcgtcgtgacgcgggtgatatggaactgtaccgcattgaagtg
ggccgtgatgatggcgttgaagtgcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcggtacccactccaccatcgaactg
ccgaaaggtatgccgggcgaagtactgcagcactttactcgcactcgcatcctgaacaag
ccgatgaacatgcagctgatgggcgatgcacagcctcgcactgaccgcggcggcgaacgt
cgtggcggtggccgcagcttcggtggcgagcgtcgtgaaggcggtcgtagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggcgaacgccgtgaaaaccgtggcccacgtcgtgac
gaaggcgcaagccgtcgccgtgacgcgtaa
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