Enterobacter cancerogenus: CWI88_03110
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Entry
CWI88_03110 CDS
T05545
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CWI88_03110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecan03021
]
CWI88_03110
Transcription machinery [BR:
ecan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CWI88_03110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AUJ80093
UniProt:
A0AAP8TDA6
LinkDB
All DBs
Position
complement(635777..637621)
Genome browser
AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEEDDDSSDDDNSIDPELAREKFAELRTQYELARDTIKAKG
RSHAAAQEQILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKDDVHRGLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgcggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcag
atcgaagacatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgccgaggaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtatatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaatcgac
atcgcgaaacgcattgaagacgggatcaaccaggttcagtgctccgttgctgaatacccg
gaagcgatcacctatcttctggaacagtacgatcgcgttgaagcggaagaagcgcgtctg
tccgatctcatcaccggcttcgtcgatccgaacgctgaagaagacatggcgcctaccgcc
acgcacgtcgggtctgaactgtctcaggaagagatggatgacgacgaagacgaagatgaa
gaagaagacgacgacagcagcgatgacgataacagcatcgaccctgagctggcgcgtgag
aagtttgccgaactgcgtacgcagtatgaactggcccgcgacaccatcaaggcgaaaggc
cgcagccatgctgccgctcaggaacagatcctgaagctgtctgaagtgttcaagcagttc
cgtctggtgcctaagcagttcgactacctggttaacagcatgcgcgtgatgatggatcgc
gtacgtacccaggaacgcatcatcatgaagctgtgcgtcgaacagtgcaaaatgccgaag
aagaacttcatcaccctgttcaccggcaacgaaaccagcgaaacctggttcaacgccgct
atcgcgatgaacaagccgtggtctgaaaaactgcacgacgtcaaagacgatgtgcatcgc
ggcctgcagaaactgcagcagattgaagaagagaccggcctgaccattgagcaggtaaaa
gacattaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagagatg
gttgaggcgaacctgcgtctggttatctctatcgccaagaaatacaccaaccgcggtctg
cagttcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagataagttt
gaataccgtcgtggctacaagttctccacctacgcaacctggtggatccgtcaggcaatc
acccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgagacc
attaacaagctcaaccgtatctcccgccagatgctgcaagagatgggccgcgagccaacg
ccggaagagctggctgaacgcatgctgatgccggaagacaagatccgtaaagtgctgaag
atcgccaaagagcctatctccatggaaacgccaatcggcgacgatgaagattcgcatctg
ggtgatttcatcgaggataccaccctcgagctgccgctggactctgccactaccgagagc
ctgcgtgctgccacgcacgacgtgctggctggcctgaccgcccgtgaagctaaagtcctg
cgtatgcgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggtaaacag
tttgacgttacccgtgaacgtatccgtcagatcgaagcgaaggcgttgcgtaaactgcgc
catccaagccgctctgaagtgctgcgtagcttcctggacgattaa
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