Enterobacter cancerogenus: CWI88_09380
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Entry
CWI88_09380 CDS
T05545
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ecan
Enterobacter cancerogenus
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecan03016
]
CWI88_09380
Enzymes [BR:
ecan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CWI88_09380
Transfer RNA biogenesis [BR:
ecan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CWI88_09380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUJ83792
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All DBs
Position
1970968..1972095
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AA seq
375 aa
AA seq
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MNYQMITTNDELASLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKRVSLIDPLGI
TDWTPMRDLLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAGFSNRPLSWGFAA
MVEEYTGLTLDKSESRTDWLARPLTARQLEYAAADVFYLLPIAGQLMKEAEASGWLSAAL
DECRMAQQRRQEVVDPKEAWRDISNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVEKAQHMPDDALPEPLLNLMDM
PGYRKAFKDIKALVQTVASESKLSAELLASRRQINQLLNWHWKLKQQNGLPEMVSGWRGE
LMAERLKTLLEGYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgatcacgaccaacgacgagctggcttcgctgtgcgaagtgacgcgc
gatttccctgctatcgccctggataccgagtttgtccgcacgcggacctactatccgcag
ctggggctgattcagatgtacgacggcaagcgcgtctcgctgattgacccgctcggcatt
accgactggacgccaatgcgcgacctgctgcttgataccgccgtcacgaaatacctgcat
gcgggcagtgaagatctggaagtgtttctcaacacctttggcatcatgccgcagccgctg
attgacacgcagatccttgccgggttcagcaaccgcccgctctcgtggggatttgcggcg
atggtcgaagagtacaccgggctcacgctggacaagagcgagtcgcgcacggactggctg
gcccgtccgctgaccgctcgccagcttgagtatgcggcagccgacgtgttttatctgttg
ccgattgccggacagctgatgaaagaggcggaagcctcaggctggctctctgccgcgctg
gacgagtgccgcatggcacagcagcgtcgtcaggaagtggtcgacccgaaagaagcctgg
cgcgatatcagcaacgcctggcagcttcgcacccgtcagctggcctgtttgcagttgctc
gccgactggcgtctgcgtaaagcgcgtgagcgcgatctggccgttaactttgtggtgcgc
gaagagcatctctgggcggtagcacgctacatgccgggcagcctgggcgagctggacagc
attgggctttcgggcagtgaaattcgcttccacggcaagacgctgctggcgctggtggaa
aaagcgcagcacatgccggacgatgcactgccggagccgttgctcaatttgatggacatg
ccgggctatcgtaaggcgtttaaagatatcaaagccctggtgcagacggtggcgagcgaa
agcaagctgagtgcagaactgctggcgtcccgtcgtcagattaaccagttgctgaactgg
cactggaagctgaaacagcagaatggtttacccgaaatggtgtcgggctggcgtggggaa
ctgatggctgaacgtctgaagacgctgctggaaggttatccgcgctaa
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