Enterobacter cancerogenus: CWI88_10445
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Entry
CWI88_10445 CDS
T05545
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ecan
Enterobacter cancerogenus
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecan03032
]
CWI88_10445 (topA)
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_10445 (topA)
Enzymes [BR:
ecan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWI88_10445 (topA)
DNA replication proteins [BR:
ecan03032
]
Prokaryotic type
DNA Topoisomerases
CWI88_10445 (topA)
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWI88_10445 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUJ81436
LinkDB
All DBs
Position
2165591..2168188
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDANVTTPGGDALPLQVSH
QNDKPFRPVNRDQTMAAVALLEKARYQVLDREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRSYISDNFGKKYLPENANQYTSKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDKTLPAVNKGDELSLVDLVPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRAENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMEDSLDQVASHQAEWKKVLDSFFSDFTNQLEKAEKDPAEGGMLPNQMVLTSIDCP
TCGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgttggtcatatccgcgatttgccgaccagt
ggctcagccagcaaaaagagcgcagactctacctccaccaaaggggctaaaaagcctaaa
aaggatgaacgtagcgcgcttgtcaaccgcatgggtgttaacccgtggcataactgggat
gcacaatatgaagtgctgcccggcaaagaaaaagtcgttaacgagctgaagcagcttgct
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaggccattgca
tggcacctgcgggaagtgatcgggggggacgacaaacgctacagccgtgtagtgtttaac
gaaattaccaagaatgcgattcgccaggcatttgaaaagccgggtgaactgaatatcgac
cgtgtaaacgctcagcaggcgcgccgctttatggaccgcgtagtgggctatatggtctcg
ccactgctgtggaaaaaaattgcccgcggcctgtctgccggtcgagtgcagtcggttgcg
gtccgtctcgtggttgagcgtgagcgtgaaatcaaagcgttcgtaccggaagagttctgg
gaagtggatgccaatgtcaccacgccaggcggcgatgcgctgccattacaggtgagccac
cagaacgacaagccgttccgtcccgttaaccgtgaccagaccatggcggcggtggcgctg
ctggagaaggcgcgttatcaggttctggatcgcgaagacaaaccgaccagcagcaagcct
ggcgcaccgtttattacctccacgctgcaacaggcggcaagcacgcgtctgggttacggc
gtgaaaaaaaccatgatgatggcgcagcgcttgtatgaagcgggctatatcacttatatg
cgtactgactcaaccaacctgagccaggacgcggtaaacatggttcgcagttatatcagc
gacaatttcggcaagaaatatctgccggaaaatgccaatcagtacaccagcaaagagaac
tcgcaggaagcgcacgaagcgattcgtccttccgatgtctctgtattagccgagtcgctg
aaagacatggaagcggatgcacaaaaactgtatcagctgatctggcgccagtttgtggcc
tgccagatgacgcctgcgaagtatgattccacgaccctgacggtcggcgcaggtgatttc
cgtctcaaagctcgtgggcgtattctacgcttcgacggctggactaaggtgatgcctgcg
ttgcgtaaaggcgacgaagacaaaacgctgcctgcggtgaataagggtgatgaactgtca
ctggtggatctggttccggctcagcacttcaccaaaccaccggcacgtttcagcgaagct
tcgctggtgaaagagcttgaaaaacgcggtatcggtcgcccgtcgacctatgcgtcgatc
atctcgacaattcaggatcgtggttacgttcgtgctgaaaaccgtcgtttctatgccgag
aaaatgggtgaaattgttaccgaccgtctggaagctaacttccgcgagttgatgaactac
gatttcaccgcgcagatggaagacagcctcgatcaggttgccagccatcaggcggaatgg
aaaaaagtgcttgatagtttcttcagtgactttaccaaccagcttgaaaaagcggagaaa
gatcctgcagagggcggcatgctgccaaaccagatggtattgaccagcatcgactgccca
acctgtgggcgcaaaatggggatccgtaccgccacaacgggcgttttcctcggctgttcc
ggctatgcgctgtcgccaaaagagcgctgcaaaaccaccatcaacctggtgccggagaac
gaagttctcaatgtgctggaaggtgatgatgcagagaccaacgccctgcgtgcgaaacgc
cgctgccagaaatgcggcacggcgatggacagctacctgatcgatccgaaacgtaagctg
cacgtctgtggtaataacccgacctgcgatggctacgagatcgaagagggtgagttccgt
attaaaggctatgacggcccgatcgttgaatgcgagaaatgtggctctgaaatgcacctg
aaaatggggcgcttcggcaagtacatggcctgcaccaacgacgagtgtaagaacacgcgt
aaaattctgcgcaatggcgaagtggcgccgccgaaggaagatccggttccgctgccggaa
ctgccgtgtgagaagtctgatgcttacttcgtgctgcgtgacggtgcagctggcgtgttc
ctcgcggccaacaccttcccgaaatctcgcgaaacccgtgcgccgctcgtggaagagctg
tatcgcttccgcgatcgcctcccggagaaactgcgttatctggccgacgcgcctcagcag
gatcccgaaggcaacaaaaccgttgtgcgtttcagtcgtaaaacgaagcagcagtacgtt
gctgcggagaaagagggcaaagcgaccggctggtccgccttctttgttgacgggaaatgg
gttgaaggcaagaaataa
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