Enterobacter cancerogenus: CWI88_15470
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Entry
CWI88_15470 CDS
T05545
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI88_15470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecan03019
]
CWI88_15470
Enzymes [BR:
ecan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWI88_15470
Messenger RNA biogenesis [BR:
ecan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWI88_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
DUF6482
Motif
Other DBs
NCBI-ProteinID:
AUJ82373
UniProt:
A0AB38P8V9
LinkDB
All DBs
Position
complement(3253789..3255162)
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AA seq
457 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQKAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRITTEGYDVDPSIQAEPIQNGRQQRGGGGGRGQQQPRRSEGGAPKASGKPP
RRNGEAKSGGENPWRSGEARPAGEGQRRRRPRKPASV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcaatcgcagagcagggc
tacgtcgagccaacccctattcagcagaaggcgattcctgccgtgctgcagggccgtgac
ctgatggccagcgcccagaccggtaccggaaaaaccgcgggctttaccctgccgctgtta
gagctgctggtaaaaaaccagccgcacgctaaaggccgtcgcccggtccgtgcgctgatc
ctgaccccaacccgcgagctggccgcgcaaattggcgagaacgtgcgtgattacagccgc
tatctcaacattcgctcgctggtggttttcggcggggtgagcatcaacccgcagatgatg
aagctgcgcggcggcgtggacgtgctggtggcaacgccgggccgtctgctggatctcgaa
caccagaacgcggtgaagctcgatcagattgaaattctggtgctggatgaagctgaccgc
atgctggatatgggctttatccacgacattcgccgcgtgctggctaaactgcctgcgcgt
cgtcagaacctgcttttctctgcgaccttctcagacgagatcaaggcgctggctgaaaag
ctgctgcataacccgctggaagtggaagtggcgcgccgcaacaccgcctccgagcaggtg
acgcagcatgttcacttcgtggataagaaacgcaagcgcgagctgctctcccagatgatc
gggcagggcaactggcagcaggtgctggtctttacccgcaccaaacacggcgccaaccac
ctggcggaacagctgaataaagacggcatccgcagcgcggcaatccacggcaacaagagc
cagggcgcgcgtacccgtgcgctggcggactttaagtctggcgacattcgcgtgctggtg
gcaacggacatcgccgcccgcggtctcgacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattatgttcaccgtatcggccgtaccggtcgcgcggcg
gccactggcgaagccctctctctggtttgcgtcgatgaacacaaactgctgcgtgatatt
gagcgtctgctgaagaaagagatcccgcgcatcaccaccgaaggctacgatgtcgatccg
tctattcaggcggagccgattcagaatggtcgtcagcagcgtggcggcggcggtggtcgt
ggacagcagcagccgcgccgttcggaaggcggcgcgccgaaagcatccggtaaaccgccg
cgccgaaacggcgaagcgaaatccggcggcgagaacccgtggcgcagcggtgaagcccgg
ccagcaggggaagggcagcgtcgacgccgcccgcgtaaacctgccagcgtgtag
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