Enterobacter cancerogenus: CWI88_19520
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Entry
CWI88_19520 CDS
T05545
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI88_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecan03019
]
CWI88_19520
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_19520
Enzymes [BR:
ecan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWI88_19520
Messenger RNA biogenesis [BR:
ecan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWI88_19520
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CWI88_19520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUJ83119
LinkDB
All DBs
Position
complement(4109890..4112340)
Genome browser
AA seq
816 aa
AA seq
DB search
MENQWQQLRAVLNGEHSERDGLSGQFFNRLLYCLDDVQAGECDRLHAFYDALQCARALGL
TPLRLPYRHLTEGAMLQHFGLRRDRDYPGELLLTREAEEIEPSLLPVWKGEQRRFLETPP
LDVLLPSVLNDPRYTHYTSAGQQQAVRTVLTSNRDKTLLVNLPTGAGKTFVIHSQMLTSP
RRLLTLVIVPTVALAIEQALRAQEVMQQAEQDHGGSYVWHSGQSIEEHNMMKSRLASGEQ
RALFCSPEAATGGLLLQLFSLAERGLLGAVMVDEAHLIDQWGAEFRPEFQLLAPLVRSLK
ATSSDGVKVVLLSATFSQSTLNTLKALFAGKRQASVIEVNGSFLRPEPVWYVSEAVSHED
YLTQVENAIARLPAPMILYTTEVEQARFWFQYLRERGYRRCGLFHGATPMQEREGLIHAW
RNDGLDIMVATSAFGVGMDKNNVRSVLHVAVPENFDRLYQESGRGGRDGKASVAHIIFHH
KQLQIARNINRTKLIGASKGYLRWAKMHQLREQHQPGQFTVPLRAKHADIRMDSQSNVDW
NLRTLLLMQRAGFIDITYPPPDLSAIATDERDEARVHAWFDHYFNHIQISVLRDGHMDEA
QWQKGIQAHRSHELAMRKQGFRVLEEWLNDPTISLCQTLAQFYTLDGFVPEIACGGCPAC
RSKGYPPFTPTLGRIAHVTGETVRNIMGNEQRVYYSTTLTNRLLLRQWSDWIARLLANRQ
IQAIRASQSVLARLGEVLPAGLPFWCSLAVDEGNTCWDELVLVLPGEAMPELDIFASINR
IIVAPERLQEPGYRGRRWWDVDTGAVALEQFQRNIS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcagtggcaacaacttcgcgcggttctgaacggagaacacagcgaacgcgac
gggctgagtgggcagttttttaaccgcctgctttactgtctggatgatgtacaggcggga
gaatgcgaccgcctccacgcattttatgatgcactgcaatgcgcacgggcactcgggctg
acgccgttaaggctgccgtaccgacaccttacagaaggcgcaatgctccagcattttggt
ttgagacgggatcgggactatcccggtgaactgctcctgacgcgcgaagcggaagagatt
gaaccctctctcttacccgtctggaaaggcgagcagcgccgttttctggaaaccccaccg
ctggatgtccttttgccctccgtactcaacgatccgcgttatacgcactacacatcagca
gggcaacagcaggcggtacgcacggtgttgaccagcaacagggataaaacgctgctggtg
aacctgcccaccggagccggcaaaacctttgtgattcactcccagatgctgacttcaccg
cgcaggctcctgacgctggtgattgtgccaaccgtagcgctggcaattgaacaggctctg
cgggcgcaagaggtgatgcaacaggccgagcaggatcacggtggcagctacgtctggcat
agcggccagtcgattgaagaacacaatatgatgaagtcgcggctggcatctggcgagcag
cgagcgctgttttgctccccggaagcagccacaggtgggctcttgttacagctgttctcg
cttgcggagcgcggacttctgggcgctgtgatggtggatgaagcgcaccttatcgatcag
tggggggcagagttccgtcccgagtttcagctactggcacctctggtgcgatcgttgaag
gctacatcatcagacggtgtcaaagtcgtactgctttctgccacgtttagtcaaagcacc
ctgaatacactcaaagcgctctttgccggtaaacgacaggcgtcagtgattgaagtgaac
ggcagttttctgcgtccggaacccgtgtggtatgtcagcgaagcagtcagccacgaggat
taccttacgcaggtggaaaacgctattgctcgcttgccagcgccaatgatcctctacacc
accgaagtggaacaggccagattctggttccagtatctacgtgagcgtggttatcggcgc
tgtggattgttccatggtgcaacaccaatgcaggaacgcgaaggtcttatccacgcctgg
cgtaacgatgggctggatatcatggtggcgacgtctgcatttggcgtggggatggataaa
aataatgtccgttccgttctgcatgtcgcagtgcctgaaaattttgatcgtctctaccag
gagagcggtcgtggcggtcgtgatggtaaagcatcggtcgctcacattattttccatcac
aaacagctacagatcgcacgcaacattaaccgaaccaaactgatcggtgccagcaaagga
tatctgcgctgggccaagatgcaccaactacgcgagcagcatcagccgggacagttcact
gtcccgctacgcgcgaagcacgccgacattcgcatggattcgcagagcaatgtggactgg
aacctgcgtaccttactgttaatgcagcgcgctggttttatcgatatcacctatccacct
ccggatcttagcgctatcgccacggacgagcgtgatgaagcaagggtccatgcgtggttt
gaccattatttcaaccatattcagatttccgtgctccgtgacggccatatggatgaagcg
cagtggcagaaggggattcaggcccaccgttcgcatgaactggcgatgcgaaaacagggg
tttagggtgttagaagagtggctcaatgaccccacaatctcgttgtgccagacgttagcg
caattttataccctcgatggttttgtgccggaaatagcctgcggcgggtgtccggcctgt
cggagtaaagggtatcctccctttactcccacgctcggtcgtatcgcacatgtgacgggc
gagacggtgcgaaacatcatgggaaacgagcaacgcgtttattattctacgacgctgacg
aaccggctattgctgcgccagtggagtgactggattgcccgcctgctggccaatcgccag
attcaggctatccgcgccagccagagcgtgctcgcccgccttggtgaggtcctgcccgca
ggtttgcctttctggtgttcacttgccgttgatgaaggaaatacctgctgggatgaactg
gtgctggtgttgcccggcgaagcgatgccggagctggacatcttcgccagcatcaatcgc
attattgttgcaccggaacgtttacaagagccgggctaccgcgggcgtcgctggtgggat
gttgataccggtgccgtggcattagaacaatttcagaggaatatcagctag
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