Enterobacter cancerogenus: CWI88_21800
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Entry
CWI88_21800 CDS
T05545
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI88_21800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecan03019
]
CWI88_21800
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_21800
Enzymes [BR:
ecan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWI88_21800
Messenger RNA biogenesis [BR:
ecan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWI88_21800
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CWI88_21800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AUJ83533
UniProt:
A0AB38NZ47
LinkDB
All DBs
Position
complement(4570190..4572019)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQDVMAGCRNGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPFIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHMG
FATQNIAQHSALQLTEAARPVLRGEIELKLAVPRVIALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSAGEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccccggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgtctggtggtcatgccgaccggcggcggtaaatcgctctgctatcaggtaccc
gcgctggtgcttaacggcctgacggtggtggtatcgccccttatctcgctgatgaaagac
caggttgaccagctgcttgccaacggcgtggcggcggcctgtcttaactccacgcagacc
cgcgaacagcagcaggacgtcatggctggctgccgtaacgggcagatccgcctgctgtac
atcgcgccggaacgcctgatgctggataacttcctcgatcacctggcgcactggaatccg
gtgctgctggcggtggatgaagcgcactgtatctcccagtggggtcacgatttccgtccg
gaatatgccgcgcttggccagctgcgtcagcgcttccccgagctgccgtttatggcgctc
accgccaccgccgacgacaccacccgccttgatatcgttcggctgctgggccttaacgat
ccgtttattcaggtcagcagctttgaccgcccgaacatccgctacatgctgatggagaaa
ttcaagccgctggatcagctcttacgctacgtccaggagcagcgcggcaagtcgggcatc
atctactgcaacagccgtgcgaaggtggaagacaccgccgcgcgtctgcaaaaccgtggc
tttagcgctgcggcctatcatgccgggttagaaaaccacatccgcgccgacgtgcaggaa
aaattccagcgcgacgatctgcaaatcgtcgtcgccacggtggcgttcggtatggggatt
aacaagcccaacgtgcgctttgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggaaacgggccgcgccgggcgcgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaagagaagccccagggccagctg
caggatatcgagcgccacaagctcaatgcgatgggcgcgtttgccgaggcgcaaacctgc
cgtcgtctggtgctgctcaactactttggcgaagggcgacaggagccgtgcggcaactgc
gatatctgcctcgatccgccgaagcagtacgatggcctgatggacgcgcgcaaggcgctc
tcaaccatctaccgtgtgaatcagcgcttcgggatgggctacgtggtggaagtgctgcgt
ggcgcgaacaaccagcgtatccgtgatatgggccatgacaagctacctgtctacggcatc
ggcaaagaccagagccacgagcactgggtcagcattatccgccagctgatccacatgggg
ttcgccacgcaaaacattgctcaacactccgcgcttcagcttaccgaagcggcgcgtccg
gtgctgcgcggtgaaattgaactcaagctcgccgtgccgcgcgttattgctctgaagccg
cgtgtgatgcagaaatcctacggcggaaactatgaccgcaagctgttcgccaagctgcgt
aagctgcgtaaagccattgccgacgaagagaacattccgccttatgtggtctttaacgac
gcgacgctgatagagatggccgagcagatgccgctcagcgccggtgaaatgctcagcgtt
aacggtgtcggcacgcgcaagctcgagcgattcggcaaggagtttatggcgcttattcgc
tctcatgccgatggtgatgatgaggagtag
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