Enterobacter cancerogenus: CWI88_21975
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Entry
CWI88_21975 CDS
T05545
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI88_21975 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecan03021
]
CWI88_21975 (rho)
03019 Messenger RNA biogenesis [BR:
ecan03019
]
CWI88_21975 (rho)
Transcription machinery [BR:
ecan03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CWI88_21975 (rho)
Messenger RNA biogenesis [BR:
ecan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CWI88_21975 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AUJ83562
LinkDB
All DBs
Position
complement(4604061..4605320)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
cagcacgctaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctccaaaagagggtgaacgttactttgcgctgttgaaagtgaatgaagttaac
tacgacaagcctgaaaactcgcgtaacaagatcctcttcgagaacttaacaccgctgcac
gcgaactctcgtctgcgcatggaacgtggtaacggttcaaccgaagacttaacggcgcgt
gtactggatctggcctcaccaattggccgtggccagcgtggcctgattgtcgcgccgcca
aaagcaggtaaaaccatgctgctgcagaacattgcgcagagcattgcttacaatcacccg
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggcgaagttgtggcttctacctttgacgaaccagcatctcgccacgtt
caggttgcagaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgactccatcacccgtctggcgcgtgcgtacaacaccgtcgtaccggct
tccggtaaagtgctgaccggtggtgtggatgcgaacgccctgcaccgtccgaagcgtttc
ttcggtgcggcacgtaacgtggaagagggcggcagcctgaccatcatcgcaaccgcgctg
atcgacaccggttctaagatggatgaagtgatttacgaagaatttaaaggtacaggcaac
atggaactgcacctttctcgtaaaatcgcggaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcattcacccaatgggcgaaatcgacgcaatggaattcctcatt
aataagctggcgatgaccaaaactaacgacgatttcttcgatatgatgaaacgctcgtaa
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