Enterococcus casseliflavus: ECBG_00293
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Entry
ECBG_00293 CDS
T02623
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ecas
Enterococcus casseliflavus
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecas03016
]
ECBG_00293
Enzymes [BR:
ecas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ECBG_00293
Transfer RNA biogenesis [BR:
ecas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECBG_00293
Prokaryotic type
ECBG_00293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
15141509
NCBI-ProteinID:
EEV38024
UniProt:
C9A6B3
LinkDB
All DBs
Position
1001846..1002583
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AA seq
245 aa
AA seq
DB search
MRNIKLTIEYDGKRYLGWQRLGDSEKTIQEKVEGVIKLLTGEEIEIVGSGRTDAGTHARG
QVANFKTTHQMSLPEMQQFFNRYLPQDIVVNKIEEVPERFHARYHAKGKQYSYYVWNNAI
PSVFARNTSFHCPQPLDLEKMQQAAEKLIGTHDFIGFSALKKSKKSTVRTIDEITITPEG
DLLRFTFKGNGFLHKMVRILTGTLIAIGDGTLPPEVIDQVLADKVRQAAGETVPSHGLFL
DEVYY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatatcaaattaacgattgaatatgacggcaagcgctacttagggtggcaacga
ctaggagattctgaaaaaacgatccaagaaaaagttgaaggggtcatcaaattattgacg
ggagaagaaattgagatcgtcggttctggcagaaccgatgcgggcacgcatgctcgagga
caagtggcgaatttcaagacgacccatcaaatgagtttgccagagatgcagcagttcttt
aaccgctatttgccgcaagacatcgtcgtcaacaagattgaagaggtgcctgagcgcttc
catgcacgctatcacgccaaaggcaagcaatacagctattatgtttggaacaacgcgatc
ccatcagtctttgctcgcaatactagttttcattgcccgcagccccttgatttggaaaaa
atgcagcaagcggctgagaagttgatcggcacccatgattttatcggcttttctgcattg
aaaaaatcaaaaaaatcaacggtgcgtacgatcgatgaaatcaccatcacaccagaaggc
gacctattgcggtttaccttcaaaggcaacggctttttgcataaaatggtccgaatcttg
acaggcacactgattgccattggcgatggcacactgccaccagaagtgatcgatcaagtg
ttagccgataaagtacgacaagcagctggtgaaacagtgccttctcatggcttatttcta
gatgaggtgtattattaa
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