Enterococcus casseliflavus: ECBG_01008
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Entry
ECBG_01008 CDS
T02623
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ecas
Enterococcus casseliflavus
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecas03019
]
ECBG_01008
03009 Ribosome biogenesis [BR:
ecas03009
]
ECBG_01008
Enzymes [BR:
ecas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECBG_01008
Messenger RNA biogenesis [BR:
ecas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECBG_01008
Ribosome biogenesis [BR:
ecas03009
]
Prokaryotic type
rRNA helicases
ECBG_01008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_RecD
AAA_22
CMS1
PRAI
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
15142222
NCBI-ProteinID:
EEV38739
UniProt:
C9A8C8
LinkDB
All DBs
Position
complement(1777844..1779190)
Genome browser
AA seq
448 aa
AA seq
DB search
MSFESFKFQPFIYEALADKKFSKPTEVQEKLIPVIQKGRSVVGQSQTGSGKTHTFLLPLM
DKIDAEKDEVQVVITAPSRELATQIYHAAKQIGGFHDPEIRVSNFVGGTDKQRQLSRLQN
QQPHVVIGTPGRILDMINEQALGVHTANVFVVDEADMTLDMGFLEEVDQIAGRLPEKLQM
LVFSATIPEKLRPFLKKYMANPLIEEIKSKAVISDTIENWLISTKGKNTNKLIYQLLTTG
HPYLAIVFANTKSRVDEITDYLKEQGLKVAKIHGDISPRERKRIMRQVQNLDYQYVVATD
LAARGIDIEGVSHVINAEIPADLDFFIHRVGRTGRNQMDGTAITLYDPSDEGAIQAIEDL
GVVFQPKEIKNGEIVATYDRNRRQKREKSRDELDPTLIGLVKKKKKKIKPGYKKKIQWAV
DKKNKEKRKIERRQTTRTARKNKKNSNS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgagtcatttaaatttcaaccatttatttatgaagcacttgctgataaaaag
ttctctaagccaacagaagtgcaagaaaaactgatacctgttatccaaaaaggacgcagt
gttgtagggcaatcacagaccggaagtggtaagacccacacatttttactgccgttgatg
gataaaatcgatgccgaaaaagatgaagtgcaagtagtgatcactgcaccgagtcgtgaa
ttagccacgcaaatctatcatgccgcaaaacaaatcggcggatttcatgatcctgaaatt
cgagtgtcaaatttcgtcggaggaacggataagcaacgtcaattaagccgtctgcaaaat
caacagcctcatgtcgtgattgggacacctggtcgtatcttggatatgatcaacgaacaa
gcgttaggggttcacactgccaatgtatttgtcgtggatgaagcagacatgaccttggat
atgggctttttggaagaagtcgatcaaattgcggggcgtttgcctgagaaactacaaatg
ctggttttctccgcaacgattccagagaaattgcgcccattcttgaaaaaatacatggcc
aatccattgatcgaagaaatcaaatcgaaagcagtcatctctgatacgatcgagaattgg
ttgatttctaccaaagggaaaaataccaataaattgatctaccaattattgactacaggc
catccctatcttgccatcgtttttgccaacacgaagagccgtgtggacgaaattacggat
tacttaaaggaacaaggcttaaaagtagcgaagatccacggcgacatcagtcctcgtgaa
agaaaacggatcatgcgccaagtgcaaaatttggactaccaatatgttgtcgcaacagat
ttagctgcgcgaggaattgatattgaaggggtttctcatgtcatcaatgctgagattcca
gctgatttggatttctttatccaccgtgttggtcggaccggtcgaaaccaaatggatggg
accgcgatcactttatatgatccaagcgatgaaggggcaatccaagccatcgaagatcta
ggggttgttttccaaccgaaggaaatcaaaaatggcgagatcgttgcgacttacgatcgg
aatcgtcggcaaaagcgggaaaaatctcgtgacgaattagacccaaccttgattggctta
gtcaagaaaaagaagaagaaaatcaagcctggctacaagaaaaaaattcaatgggccgtt
gataagaagaacaaagaaaaacggaagatcgaacgtcgtcaaacgactcgaaccgcccgc
aaaaacaagaaaaattcgaatagctaa
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