Enterococcus casseliflavus: ECBG_01413
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Entry
ECBG_01413 CDS
T02623
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ecas
Enterococcus casseliflavus
Pathway
ecas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECBG_01413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecas03021
]
ECBG_01413
03400 DNA repair and recombination proteins [BR:
ecas03400
]
ECBG_01413
Enzymes [BR:
ecas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECBG_01413
Transcription machinery [BR:
ecas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECBG_01413
DNA repair and recombination proteins [BR:
ecas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECBG_01413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TUTase
YQBQ
DUF4843
Motif
Other DBs
NCBI-GeneID:
15140863
NCBI-ProteinID:
EEV39144
UniProt:
C9A9I3
LinkDB
All DBs
Position
265292..266230
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPRIAKIDEDKDYGKFIVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVL
HEFSTVKGVREDVAQIILNIKGLALKMYGDEEKTLEIDISGPATVTAGDIIVDSDVEILN
KDMYICTVSEGATFHARLTVKPGRGYVQADENKKEDMPIGVLPVDSIYTPVRRVNYQVEN
TRVGRRDDFDKLTMEIWTDGSIEPLEAMSLSAKIMTEHLDIFVNLTDEAKNAEIMVEKEE
TQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEEVKVK
LHDLGLGLRKDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattcgaaaaaccaagaatcgcaaagattgatgaagacaaagattatggcaag
ttcatcgtggaacctcttgaaagaggctacggaactacactaggaaattccctacgtcgt
attttattatcttctttacctggtgcggcaatcaccaatattcaaatcgatggagtttta
cacgaattctcaactgttaagggtgttcgggaagacgttgctcaaatcatcttgaatatt
aaaggtcttgcattgaaaatgtacggggatgaagaaaagacccttgaaattgatatttca
ggacctgctacagtaactgctggcgatatcatcgttgatagtgatgtagaaatccttaac
aaagatatgtatatctgtaccgtttctgaaggtgctacgttccatgctcgcttaacagtg
aaacctggccgcggctacgttcaagcggacgaaaacaaaaaagaagacatgccgatcggc
gttcttccagtcgattcaatctatacaccagtacgtcgtgtcaactaccaagtagaaaac
acacgtgtcggtcgtcgggatgatttcgacaaattaacgatggaaatatggactgatggc
tcaatcgaaccattggaagcaatgagtttgtctgcgaagatcatgactgaacatttagac
atctttgttaacctaacggatgaagcgaaaaacgctgaaatcatggttgaaaaagaagaa
acacaaaaagaaaaaatgttggaaatgacgatcgaagaattagacttatctgttcgttca
tacaactgtctaaaacgtgcaggaatcaatactgtacaagaattgacaaacaaatctgaa
ccagaaatgatcaaagtaagaaacttaggccgtaaatctcttgaagaggtcaaagtgaaa
ttacatgatttaggtttaggactacgtaaagacgattaa
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