Enterococcus casseliflavus: ECBG_01819
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Entry
ECBG_01819 CDS
T02623
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecas
Enterococcus casseliflavus
Pathway
ecas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECBG_01819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecas03019
]
ECBG_01819
03400 DNA repair and recombination proteins [BR:
ecas03400
]
ECBG_01819
Enzymes [BR:
ecas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECBG_01819
Messenger RNA biogenesis [BR:
ecas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECBG_01819
DNA repair and recombination proteins [BR:
ecas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECBG_01819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TniB
DUF5838
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
15142763
NCBI-ProteinID:
EEV39550
UniProt:
C9AAN9
LinkDB
All DBs
Position
complement(2360037..2361419)
Genome browser
AA seq
460 aa
AA seq
DB search
MLEDALNQYFGFKTFRQGQKEVIESVLAQQDTLAILPTGNGKSLCYQLPGYLVDGIVIII
SPLVSLMEDQVYGLQKQGEKHAIAFNSQLDLADRQYVMQHLQKYKFLFLSPEMIVQEAVL
HQLEQVKIAMLVVDEAHCVSQWGIDFRPEYLQLGEVKKRLKAPVTLALTATATAQVEADI
RQVLLAKNANVYRYSMNRSNIGLFVEQTTDKDAALADYLSRLGGAGIIYCSTRSKVEEVY
NKLRQHYLVGYYHGGLASDQRKTLQQQFSQNKLKLLVATNAFGMGINKEDIRFVIHYDLP
DSLENYSQEIGRAGRDGKQSNAILLYQEHDEQIHYFFQRENKEERLALERMVQEKRIEPL
TPLQEKWQQKMKELGTSFWLETLKRNEQQKQEQLQKMLAYIHFTGCRRQFLLAHFGEEAQ
ENPYCCDNDGIEIAGEEKLPEKKEAHHWQERLIKIFKDIN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagatgcactgaatcagtattttggtttcaaaacattccgccaaggacaaaaa
gaagtcatcgaaagtgttttagcacagcaagatacgttagcgattctgcctactgggaat
ggcaaaagtctgtgctatcagctgccagggtacctagtagacgggatcgtgatcattatc
tcgccgttagtctctttgatggaagatcaagtctacggcttacaaaagcaaggggaaaaa
cacgcgattgcgtttaatagtcaattggaccttgctgatcgccagtatgtgatgcagcat
ttgcagaagtacaagtttttgtttttaagtccagaaatgatcgtacaagaagctgttttg
catcaattggaacaggttaagatcgccatgctcgtggtggatgaagcccattgtgtttcg
caatggggcattgattttcgaccagagtacttgcagcttggtgaagtaaagaaacgcttg
aaggcacccgtcacattagccttgacggctactgcaacagcacaagtggaagcagacata
cggcaagtattattagcaaagaacgccaatgtctaccgttattcgatgaaccgcagcaat
atcggcttgttcgtagagcaaacgacagacaaagatgcggcattagcagactatctcagc
cgcttaggcggggctgggatcatctactgttccacaagaagcaaagtcgaagaagtctat
aacaaactgcgtcagcactatttggtaggctattatcatggtggtctcgcgagtgatcaa
agaaaaacgttgcagcagcagttttctcagaataaattaaaattactcgttgctaccaat
gcctttgggatggggatcaataaggaagatattcgctttgtgatccattatgatctacct
gattcgttagagaattacagtcaagaaatcgggcgagctggtcgtgatggcaaacaaagc
aatgcgattttgctttatcaggaacatgatgagcagatccattacttctttcagcgagaa
aataaagaagaacgccttgctttagaacgaatggttcaggagaagaggatagaacccttg
acaccgttgcaagaaaagtggcagcaaaaaatgaaagagttggggacttccttttggctg
gaaacattaaaacgcaatgaacagcaaaaacaagaacaattacagaaaatgttggcttat
attcattttacaggttgtcgccgacaatttttactggcgcatttcggagaggaagcccag
gagaatccttattgttgcgacaatgacgggatcgaaatagcgggtgaagaaaagctgccc
gagaaaaaggaagcccatcattggcaggaacgtttaataaaaatttttaaagatataaat
tga
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