Enterococcus casseliflavus: ECBG_01993
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Entry
ECBG_01993 CDS
T02623
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ecas
Enterococcus casseliflavus
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecas03400
]
ECBG_01993
DNA repair and recombination proteins [BR:
ecas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECBG_01993
Archaeal homologous recombinant proteins
ECBG_01993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
WHD_NrtR
Motif
Other DBs
NCBI-GeneID:
15142588
NCBI-ProteinID:
EEV39724
UniProt:
C9A4Q8
LinkDB
All DBs
Position
complement(2168151..2171279)
Genome browser
AA seq
1042 aa
AA seq
DB search
MQPKSLQMKNFGPFIDEKLDFSQLQAGGLFLISGKTGAGKTTIFDGMTFALFGETSGNLR
SGKEMRSMFASPTGETSVTFTFEHQRFTYQIQRKPEQTLAKKRGDGVTNQTAKVQLTIFD
AEGKEKKQISKRTEVDAFIKDLLQLDAKQFFQIMMLPQGEFRNFLIASSNEKERVLRNLF
GTEMYQQFNEWLKEQVKAQSKKLEHQQLLASQIMERFEWEEAQEVLTVAEGLTLWAQDLE
KQQAQLQQLLHQKDQAIQEMKAAQDAFYRAKEIENARIEWQGLQEKSRELHAKKNEIAQK
KAQLNQLVWALEHQEIMQQKEERVKEAQQATQQINETKQQLQEIQQQQVSWQDQRALIDG
IKKKQEAASQKVQRIQQQIPLAQRTQAQQEEVVQLEKAAQQQTTELTKINQAQASAKAQA
QHLAEEIEALRGFQAEAVKLVETQALVEKWQQAKAQFREAEQKAGEQQQIHSELVLEQQQ
LAASLLELQKTLKQETSQNARMQIARLRLLLEENEPCPVCGSLDHPNTQEHTTYRIEDII
ASEQRLEQTQEKLTKIQQQVSANQTLQEQATLRISEWQATSAAAQKQVAFAWTTVQQAFA
ALQPIENQETITEETTVAELKKRQSFNQQKAASYEDAQKKHQAVNEKLATLNESYQQVSE
QAKKAQEARQLAEGKLASLQEQLAGATYEQLQADLAKTNGLLREYTQQIEADARQEAQLN
EQQAILSEKLKNLQQFFEEKQAAKTKAEQRLTQRLQEAGMTEETMRELIAQAAQTTVLSE
EIKTYEQETVFVQQRLALLDAQLKEQAAIDLNQLEADYLQLQTVMEELQQETVRKQEKVN
GNQRLFDELQVIYQQNVEELAQLGQLQQLAETINGENVKKTSLERYVLQQFLTEILEVAN
ERLARLTRGRYQFELADKVGSYRSSTGLEIDIYDDNAGQVRRAHTLSGGESFIAALALAI
SLADVIQQRAGGIEIEALFIDEGFGSLDEESLEMAMEALEMIENEGRMIGIISHVRELRA
RILQQVFVETNGSGQSRIRIKE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgaagtctttacaaatgaaaaattttggtccattcattgatgaaaaattggat
tttagtcagctgcaagctggtggtttgtttttgatcagcggcaaaacgggtgcaggaaaa
acgacgattttcgatggcatgacgtttgccttgttcggtgaaacatcagggaatctgcgc
tcaggcaaagaaatgcgctcgatgtttgcttcaccaaccggagagaccagcgtcaccttt
acttttgaacatcagcgttttacctaccagatccaacggaaaccggaacagaccttagca
aaaaaacgtggtgacggggtcaccaaccaaacggcaaaagtccagctgacgatttttgac
gccgaaggcaaagagaaaaagcagatcagtaaacgcacagaagttgatgcatttatcaag
gatctgctgcagctggatgccaaacagttttttcaaatcatgatgttgccgcaaggagaa
tttcgtaattttttgattgccagcagcaatgagaaagaacgcgttttacggaatttattt
ggcacggaaatgtatcaacaatttaatgaatggttgaaagagcaagtcaaagcacaaagt
aaaaagcttgagcatcagcagctgctcgcctcgcaaatcatggagcgctttgaatgggaa
gaagcgcaggaggttttaacggttgcggaaggtctgactttgtgggcgcaggatttagaa
aaacaacaggcgcagcttcagcagttattgcaccaaaaagaccaagcgatccaagaaatg
aaagctgcgcaagacgctttttaccgtgcaaaagaaattgaaaatgcacggatcgaatgg
caaggtctacaagaaaaatcccgagagctgcatgctaaaaaaaacgagatcgctcagaaa
aaagcacagttgaaccagttggtatgggcgcttgaacatcaagaaatcatgcagcaaaaa
gaagaacgagtgaaagaagcacaacaagctactcagcaaatcaacgaaacaaagcagcag
ctgcaagaaattcagcagcaacaagtaagctggcaagaccaacgagcgttgattgacggc
atcaagaaaaaacaggaagctgctagtcaaaaagttcaacgaatccagcagcagatcccg
ctagcacagcgcacacaagcgcagcaagaagaagtggtgcaacttgaaaaagccgcacaa
caacagaccaccgaattaacgaagataaaccaagcgcaagcaagtgccaaagcgcaagcg
cagcatctggcagaagaaatcgaagcattgcgagggtttcaagcagaagcggtgaaatta
gtagaaacgcaggctctggtagaaaaatggcagcaagcaaaagcgcagtttcgtgaagcc
gagcaaaaagcaggggaacagcaacaaattcattcggagttggttcttgaacaacagcaa
ttagcagcatccttgctggagctgcaaaaaacgttaaaacaagaaaccagtcaaaatgct
cgaatgcaaattgctcggcttcgtcttttgctggaagaaaatgaaccctgtccggtttgc
ggatccttggatcatccgaatacacaggagcacacgacctatcgcatcgaagacatcatt
gccagtgaacaaagacttgagcaaacacaagaaaaattgacgaagatccagcagcaagta
tcggcaaatcaaacgctgcaggagcaagccacattgcgaatcagcgaatggcaagccacc
agtgctgctgcgcagaagcaagtggcattcgcttggactacagttcaacaggcatttgct
gccttgcagccgatagaaaaccaagagacgattaccgaggaaacgacggtagcggaacta
aagaaacggcaatctttcaatcaacaaaaagccgcttcttatgaagacgcgcagaagaaa
catcaggcagtaaatgagaaattagcaacgttaaatgagtcctatcagcaagtcagtgag
caagcgaaaaaagcccaagaagcgcgccagcttgcggaggggaaattggcttctttacag
gaacaacttgcaggcgcaacgtatgaacaattacaagccgatttagcaaaaaccaatggt
ttactgagggaatatacgcaacaaattgaggctgatgcccgacaagaagcgcagctaaac
gaacagcaagcgattctttcagagaagctgaaaaatctgcagcaattttttgaagaaaag
caagcggctaagacaaaagcagaacaacgactgacgcagcgactccaagaagctggtatg
acggaagaaacgatgcgggaattgattgcccaagccgctcaaacaaccgttctctcagaa
gaaatcaaaacctatgagcaagaaacggtgtttgttcagcaacggctagcattgttagat
gcacagttaaaagagcaagctgcgatcgatttaaaccaattggaagctgactaccttcag
ttgcagaccgtgatggaggaactacagcaagaaacagttcgcaaacaggagaaagtcaac
ggcaatcaacggttgtttgacgagctgcaggtcatttatcagcaaaatgtcgaagaactg
gcccaattaggccaacttcagcagttggcagaaaccatcaacggcgaaaacgtcaaaaaa
accagcttggaacggtatgtactgcagcaatttctgacagagatcttagaagtcgccaat
gaacgcttggctcggttgactcgtggccgctatcaatttgaattagcggataaagtcggg
agctatcgaagctcaacaggcttagaaattgacatatatgacgataatgcgggacaagtc
agaagagctcatacactttcaggcggcgaaagctttattgctgccttagcgttggcgatc
tctttggcggatgtgatccagcaacgagctggtgggatcgagatcgaagccctctttatt
gatgagggctttggatcgcttgatgaagaatcattggaaatggcgatggaagcattagaa
atgatcgaaaatgaagggcgcatgattgggatcatcagtcatgttcgagaactgcgggca
agaatcctgcagcaagttttcgtagaaactaacggcagcgggcaaagccggatccgaata
aaagaataa
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integrated database retrieval system
