Enterococcus casseliflavus: ECBG_02081
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Entry
ECBG_02081 CDS
T02623
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecas
Enterococcus casseliflavus
Pathway
ecas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECBG_02081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecas03019
]
ECBG_02081
03400 DNA repair and recombination proteins [BR:
ecas03400
]
ECBG_02081
Enzymes [BR:
ecas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECBG_02081
Messenger RNA biogenesis [BR:
ecas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECBG_02081
DNA repair and recombination proteins [BR:
ecas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECBG_02081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
15142503
NCBI-ProteinID:
EEV39812
UniProt:
C9A4Z6
LinkDB
All DBs
Position
complement(2080419..2082185)
Genome browser
AA seq
588 aa
AA seq
DB search
MQTIQTVLKEHFGYSQFREGQETIIQSILTQQNVLGIMPTGGGKSICYQLPALLLDGVTL
VISPLISLMKDQVDSLVDMGIPAAYINSSLTGAQINQRLQEARQGRIKLLYVSPERLDSE
AFRYSLRQMPIALLAVDEAHCISQWGHDFRPSYLRLAETIDNWEQKPTIVALTATATPKV
AEDIENLLSIPAENQVKTGFARENLAFQVVKDQKDTYITTYLKMNQGQSGIIYASTRKEV
ERIYHLLKHEHVSVGYYHGGLSEEERSFFQEEFLYDRLQVMVATNAFGMGINKSNVRFVI
HAQIPGNLESYYQEAGRAGRDGEPSDAILLYAPQDMQIQQFFIDQSESDILYRQNEYLKL
REMSQYGHTQLCLQRYILRYFGEDGPDCGRCSNCLDEREQVDITVDTQKVLSCVKRMGER
FGKALVGKVLTGSGDQKVKQWGFEKLPTYGLMKDWSQKEVNQLIDYLTASGYLLPSEGQY
PLLSVTNAGIDVLLGKAKVYRKQTKVKQLVVDDELFDQLRTLRLNLAQEQNLPPYVVFSD
KTLRELAEVQPKTPIEFLQIKGVGQNKLDKYGDAFLALLSEYEKTESD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactattcaaacagtcttaaaagaacattttggctattcacagtttcgtgaaggt
caagagacgattattcaatctattttaacacaacaaaatgttttgggaatcatgcctact
ggtggcgggaaatcgatttgttatcagttgccagcgctcttgctggatggggtcaccttg
gtcatttcccctttgatttctttaatgaaagatcaagtagacagcctcgttgatatgggg
atccctgctgcttacatcaattcttccttgacaggagcacagatcaatcaacgcttgcaa
gaagctcgccaaggacgaatcaagctgctgtacgtttctccagaacgcctggactcagaa
gcttttcgctattcgctgcggcagatgccgatcgctttgttagccgtcgatgaggcccac
tgtatttcccaatggggccacgattttcgcccgagctatctgcggctcgccgaaacgatc
gacaattgggaacaaaagcccacgatcgtagcccttaccgcaacagctacgcccaaagtt
gccgaagatatcgaaaacttactttcgattccagctgaaaatcaagtcaagaccggcttt
gcacgggaaaatttggcttttcaagtcgtcaaggatcaaaaagatacctacataacgacg
tatttgaaaatgaaccaaggacaatcaggtattatttacgccagcacccgcaaagaagtg
gaacgaatctatcacctgttgaagcatgaacacgtgtcagtcggatattaccatggcggg
ctttcagaagaagagcgctcctttttccaagaagaatttctctatgaccgcctacaagtg
atggtagccaccaatgcattcggaatgggaatcaacaaaagcaacgtccgcttcgtgatc
catgcccagataccaggtaatttggagtcttattatcaagaagcagggcgtgctggacga
gatggggaacctagtgatgcgatcttgctttatgcgccgcaagacatgcagatccagcaa
ttctttatcgatcaatccgaatcagacattctttatcgccaaaacgaatacttgaagttg
cgggagatgagccaatacggacatacccaactgtgtttgcagcgctatattttgcgttat
ttcggagaagatggtcccgattgcggtcgttgcagcaattgtcttgatgaaagagaacaa
gtggatatcacagtggatacacaaaaagtgttgtcatgtgtgaaacgaatgggcgaacgc
tttgggaaagccttggtggggaaagtgctaactggctcaggcgatcaaaaagtcaaacag
tggggctttgaaaagttaccaacttatggattaatgaaagattggtcccaaaaggaagtc
aatcagctgatcgattatttaacagcatcagggtatcttttgccgtctgaagggcaatac
ccgttgttaagtgtgaccaatgcggggattgatgtgttgcttggaaaagcaaaagtttat
agaaaacaaaccaaagtcaaacagttagtggtggatgatgagctattcgatcaactgcgc
accttacgattgaatctcgcacaagaacaaaatttgccgccgtatgtggttttttctgat
aaaacactgcgagagctggcagaagtccagccaaaaacaccgatcgagtttttacagatc
aaaggagttggccaaaataagttggataagtatggcgacgcctttttagcattgctttct
gaatacgaaaagacggaaagtgactaa
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