Enterococcus casseliflavus: ECBG_02449
Help
Entry
ECBG_02449 CDS
T02623
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecas
Enterococcus casseliflavus
Pathway
ecas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECBG_02449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecas03019
]
ECBG_02449
03016 Transfer RNA biogenesis [BR:
ecas03016
]
ECBG_02449
Enzymes [BR:
ecas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECBG_02449
Messenger RNA biogenesis [BR:
ecas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECBG_02449
Transfer RNA biogenesis [BR:
ecas03016
]
Prokaryotic type
tRNA degradation factors
ECBG_02449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF3243
SPATA25
Alpha_Helical
Motif
Other DBs
NCBI-GeneID:
15143313
NCBI-ProteinID:
EEV40180
UniProt:
C9ABC1
LinkDB
All DBs
Position
complement(2939236..2941353)
Genome browser
AA seq
705 aa
AA seq
DB search
MTEKQVFKTTWGGRPLEVEVGQLAKQANGAVLVRYGDTVVLSAAVASKEAKDTDFFPLTI
NYEEKMYAVGKVPGGFIKREGRPSTEATLTARLIDRPIRPMFAEGFRNEVQVTNIVMSVE
QDCTPAMAAMLGSSLALSISDIPFDGPIAGVDVGRVNGEYVLNPTVEQAEQTDIELTVAG
TKKAINMVESGAKEVSEEDMLGALLFGFDAIKELVAFQEEVVAAVGKPKMEVKLLQVDAD
LKKEIFDGYYQTMKTAVMTEEKLAREDEIDKVKDTVKEVYAEKFAGHEEEAQFLKEVKQI
AEDLEKDVVRELITIDKIRPDGRQLDEIRPLASEVGLLPRVHGSGLFTRGQTQALSACTL
APLGEHQIIDGLGVEESKRFIHHYNFPQFSVGSTGRAGSPGRREIGHGALGERALAQVIP
DETDFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVSDGENYT
ILTDIQGLEDHLGDMDFKVAGTKDGITALQMDIKIQGITEQILTEALDQAKKARMEILNE
LTSTLAAPREELSQYAPKIEMIQIDPAKIKDVIGKGGDTINGIIDETGVKIDIDQDGKVS
IASADAEMIQKAIKIIEELTKEVKVGEVYLGKVVRIEKFGAFVNLIKGKDGLVHISQLAN
ERVNKVEDVVKEGDEILVKVTEIDKQGRVNLSRKALLNEDKAEKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaacaagtattcaaaacaacttggggcggccgcccattagaagtagaagtt
ggccaattagccaagcaagcaaacggagctgtattggttcgttatggcgatacggttgtc
ctaagtgcagcggttgcatctaaggaagcaaaagataccgactttttcccattaacgatc
aattacgaagaaaaaatgtatgccgtagggaaagtacctggtggctttatcaaacgtgaa
ggacgtccaagtacggaagcaaccttgactgcccgcttgatcgaccgtccgatccgtcca
atgtttgcggaaggcttccgtaatgaagtacaagttacaaacatcgtaatgagtgttgaa
caagattgtacgccagcaatggcggcaatgttaggttcttctttagcgttatctatttca
gatatcccgtttgacggaccgatcgccggtgtcgatgtcggtcgggtcaatggcgaatac
gtcttgaatccaacagtagaacaagcagaacaaaccgatatcgaattgacagtagctgga
acgaaaaaagccatcaacatggttgaatcaggagcgaaagaagtttctgaagaagacatg
ttaggtgcgttattattcggttttgatgctatcaaagaattggttgccttccaagaagaa
gttgtcgcagctgtgggcaaaccaaaaatggaagtcaaattgttacaagtagatgctgac
ttgaaaaaagaaattttcgacggctactaccaaacaatgaaaactgctgttatgacggaa
gaaaaattggctcgtgaagacgagatcgataaagtcaaagacacagtgaaagaagtgtat
gcagaaaaatttgctggacatgaagaggaagcacaattcttgaaagaagtgaaacaaatc
gcagaagatcttgaaaaagatgtggttcgcgaattgatcaccatcgacaagattcgtccg
gatggccgtcaattagacgaaatccgtccattggcatcagaagttggcttattgccacgt
gttcatggttctggtctatttactcggggacaaacccaagccttgtctgcttgtacgtta
gcacctttaggtgaacaccagatcattgatggattaggggttgaagaatcaaaacgattc
atccaccattacaacttccctcaattttctgttggttcgactggtcgtgctggctcacca
ggacgtcgtgaaatcggtcatggtgcattaggcgaacgtgccttagcacaagtgattcct
gatgaaacagacttcccttacacaatccgtcttgttgcagaagtattagaatcaaatggt
tcttcttctcaagcaagtatttgtgcaggaaccttagcgttgatggatgcaggggtgcca
atcaaagcaccagttgcaggtatcgcaatgggacttgtatctgatggtgaaaactacacg
atcttaacggatatccaaggcttagaagatcaccttggcgatatggactttaaagttgct
ggaaccaaagatgggatcactgcgttacaaatggatatcaagatccaaggaatcactgaa
caaatcttgacagaagcattagatcaagcgaaaaaagcgcggatggaaatcttaaatgaa
ttgacatcaacattggctgctcctcgtgaagagttaagccaatacgcaccgaagatcgaa
atgatccaaatcgatcctgcgaagatcaaagatgtaatcggtaaaggcggcgacaccatc
aatggcatcattgatgaaactggcgtgaaaatcgatatcgatcaagacggaaaagtttcg
attgcttctgctgatgcagaaatgatccaaaaagccatcaagatcattgaagaattgacg
aaagaagtaaaagttggcgaagtgtaccttgggaaagttgtccgtattgaaaaattcggt
gcgtttgtcaacttgatcaaaggcaaagacggcttagttcatatttcacaacttgcgaac
gaacgggtcaacaaagtggaagacgttgtcaaagaaggcgacgaaatcttagtgaaggtt
acagaaatcgacaaacaaggtcgtgtgaacctttcaagaaaagcactattgaacgaagac
aaagcagagaaaaaataa
DBGET
integrated database retrieval system
