Enterococcus casseliflavus: ECBG_02771
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Entry
ECBG_02771 CDS
T02623
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ecas
Enterococcus casseliflavus
Pathway
ecas02020
Two-component system
ecas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECBG_02771
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ECBG_02771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecas03021
]
ECBG_02771
Transcription machinery [BR:
ecas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECBG_02771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_23
HTH_17
HTH_21
HTH_IclR
Sigma70_r4
LacI
Sigma70_r4_2
HTH_Tnp_ISL3
MarR_2
Motif
Other DBs
NCBI-GeneID:
15142998
NCBI-ProteinID:
EEV40502
UniProt:
C9AC93
LinkDB
All DBs
Position
complement(2594490..2595803)
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AA seq
437 aa
AA seq
DB search
MKFQQQFSQQQKQTQKLAMTQKLQQSIQVLQFSADELLSFIDNQALENPLIDLGEYDSPI
TPSKSNASEQLMDYLSQIPDQHTSLFEYLIDQVHLNYRDTFLRTIVLFLVEYIDLNGFLT
IDLEEAGKLVGGTPIQMLDALTLIQQLDPAGVGARDLRECLMLQTERDDYAPPMAYLILE
EFFTEMAERKWDKISKALQIPLTEIQKVFDYVQTLTPTPGAAFGSTDGLYIVPDLRVTVE
KGQPIVKSNKRALPEVRFQQQYFDQLKQSGDPEVLSYLDNKAQEFEWLKKTLLQRGDTIY
RVGVQIVARQKEFFTQPDRPLKPLVLREVAEELGIHESTVSRAVNGKYLETSFGVFELKL
FFGQKVSTQESGDDLTTASIKQQLKALIDEENKNKPLSDQKLTDALKAQGIDISRRTVAK
YREAMNIPGSSKRKRFE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcaacagcaattttcacaacaacaaaaacagacgcaaaagcttgctatgacg
cagaaattacagcaatcgatccaagtgttgcaattttctgcagacgaattattgtccttc
atagataaccaagcattagaaaatccattgattgatctgggggaatatgattcgcccatc
acaccaagcaaaagcaatgcatcagaacaattgatggattatttaagccagatccctgac
cagcatacgtctttattcgaatacctcattgatcaagtgcatttaaactaccgagatacc
ttcttgcggacgatcgttttatttttagtcgagtacattgatttaaacggctttttgacg
attgatctggaagaagctggaaagcttgttggtgggaccccaatccaaatgctcgatgcc
ttgaccttgatccagcagctagatccagcaggcgtcggtgctcgtgatctaagagagtgt
ttgatgctgcaaacggaaagagatgactatgcgccgccaatggcctatctcattttagaa
gaattttttacggaaatggcagagcgcaagtgggacaaaatcagcaaagcgctgcagatt
ccattaactgagatccaaaaggtctttgattatgttcaaacattgacccccacaccaggg
gctgcgtttgggtcaaccgatgggctttacatcgttcctgacctgcgggtgacggttgaa
aaaggacagccgatcgtgaaatcaaacaaacgcgccttaccagaggttcgctttcagcag
caatattttgatcaattgaagcaaagcggtgatccagaggtcttaagttatttagacaat
aaagcccaagagttcgagtggctgaaaaagaccttgctgcaacgaggggataccatctat
cgtgtcggggtgcagatcgttgcacggcaaaaggagtttttcactcaaccagatcgccca
ttaaagccattggttttaagagaagttgccgaagaattagggattcatgaatcaacggtc
agccgagcggtcaacgggaaatacttggaaacctcctttggggtgtttgaattaaaacta
ttttttggacagaaagtttcgacacaagaaagcggtgatgacctgacgacggcatcgatc
aaacagcagctaaaggcactgatcgatgaagaaaacaaaaataaaccattgtcagatcag
aagttgacagatgccctcaaagcccagggcatcgatatttccagacgaacggtggcaaag
tatcgtgaagctatgaatatcccaggttcttccaagcggaaacgattcgagtaa
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