Equus caballus (horse): 100034019 Help Entry 100034019         CDS       T01058                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism ecb  Equus caballus (horse) Brite KEGG Orthology (KO) [BR:ecb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:ecb03009]     100034019 (PDCD11) Ribosome biogenesis [BR:ecb03009]  Eukaryotic type   90S particles    Other 90S particles     100034019 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 OB_PDCD11 HAT_Syf1_CNRKL1_N Spt6_S1 HAT_PRP39_N HAT_PRP39_C OB_RRP5 HAT_Syf1_CNRKL1_C OB_RRP5_4th Suf TPR_14 CFAP70_mid_TPR PRP6_TPR TPR_19 DUF8501 CFAP70_TPR_C UTP6_C ARM_TT21 TPR_CcmH_CycH TPR_YpiA_C ARM_TT21_5th DUF2110 DUF7017 Motif Other DBs NCBI-GeneID:  100034019 NCBI-ProteinID:  NP_001296442 Ensembl:  ENSECAG00000020507 VGNC:  21228 LinkDB All DBs Position 1:complement(27056209..27100181) Genome browser AA seq 1871 aa AA seqDB search MATMEESFPRGGTRKPHKSDKAFQQSVEQDNLFDISTEQESTKRKKNQKGPAKTKKLKVE KRESSKSIREKFDILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT KKLSEQVAQEEPLKDLARLPELFSPGMLVRCVVSSLSVTEKGKKNVKLSLNPKNVNEVLS AEALKPGMLLTGTVSSLEDHGYLVDIGVAGARAFLPLQKAQEYIRQNKGAKLKVGQYLNC IIEEVKGSGGVVSLSIGHSEVSTAIATEEHNWTLNNLLPGLVVKAQVQKVTPLGLTLNFL SFFTGLVDFMHLDPKKAGKYFSNQAVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTRLSC QHLGAVLDNVPVQGFFSKAGATFRLKDGALAYARLSHLSDPKNVFNPETFKPGNTHKCRI IDYSQMDELALLSLRTSVIEAQYLRYHDIKPGALVKGTVLTIKPYGMLVKVGEQIRGLVP PMHLADILMKNPEKKYRTGDEVKCRVLLCDPEARKLMMTLKKTLVESKLPAITCYADAKP GLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVVVLNCEP SKERMLLSFKLLSDSKKECAGHNQKKRRAVNVGQLMDVKVLEKTKDGLEVAVLPHNIPAF LPTPHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSERHVLLCRKPALVSTVEGGQDPKSF SEIHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKV TNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEM TPGMVLDLEVQEVLEDGSVLFSEGPVPGLVLRANRYHRAGQEVESGQKKKAVILNVDMLK LEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTF RFDSEKLHVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRQTRKDSEAVDEDEEVDATL VVGTVKKHTLSIGDMVTGTVKSIKPTHVVVTLADGIIGCIHASHILDDVPAGTSPTAKLK VGKTVTARVIGGRDVKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSPLEK IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQA LKATVVNPDSSKAFLCLSLIGPHNLEKGEVAMGRVVKVTPKKGLTVSFPFGKIGRVSIFH VSDSYSETPLEDFTPQKVVRCYVLSTAGHVLTLSLRSSRTNPETKSKIADPEINSLKDIR EGQLLRGYVKSVQPHGVLFGLGPSVVGLAQYPHVSQYSPTEKALYNRHLPEGKLLTAKVL SLNHQKNLVELSFLPGDTGKPDVFPASLGLLLLKPEERRIEAEVDREGEEERKKNQKRKE KRSQKGQEEAQLSSKKKEPQKPQAKKQGKRLRLESGSGQERVNKKQKKAAPSEGDDSGVE VYYREGEEEIEETSVLPKGKPTRPAEVPRLQLSSGFVWDVGLDSLTPALPLRGESSDSEE DEKPQQSMQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSSI LWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKV FERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRGQ AGASHRVMQRALECLPVKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSV YIDMIIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALE YVEAKSSVLED NT seq 5616 nt NT seq  +upstreamnt  +downstreamnt atggcaaccatggaagaaagcttcccccgagggggtacgagaaagccccacaaatcagac aaggctttccagcagtcagttgaacaagacaacttatttgatatttctactgaacaagaa tccaccaaaaggaaaaagaaccagaaaggaccagcaaaaacaaagaagttgaaagttgaa aagagagaaagcagcaagtctataagagagaaatttgatatccttagtattgagtccctg tgtgaggggatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt agtctccccaatggcctccaggggtttgtgcaagtgactgaaatctgtgatgcttatacc aaaaagctgagtgagcaagtggcgcaagaagaacctctaaaggacctggcccgcttgcct gaactcttctcgcctgggatgctggtgagatgtgtggtgagcagtctgagcgtcacagag aagggcaaaaagaatgtcaagctatctctgaaccccaaaaatgtcaacgaagtattgagt gctgaggccctgaagccaggcatgctgctcacaggcaccgtgtccagcctagaagaccat ggctatctagtggacattggtgttgctggggccagagcttttctgccactgcagaaagcg caggagtatatccggcagaacaaaggtgctaaactgaaggtgggccagtacctgaactgc atcattgaagaggtaaaaggcagcggaggagttgttagtctgtctattggtcattcagaa gtttctactgccattgctactgaggagcataactggacccttaataacttgctgccaggg ctggtagttaaagcccaggtacagaaggtgactccgcttggccttacgctaaacttcctc tcattcttcactggcctggttgactttatgcacctggatcccaagaaagctggaaaatat ttctcaaatcaagcagtgcgggcctgtgtcctctgtgtccatcctcggaccagagctgtg cggctgagcctgcgtcccgtcttcctgcagcctgggcgccccctcacccggctctcttgc cagcatctgggagctgtgctggataacgttcctgtccagggctttttcagcaaggccggg gccacctttaggctgaaggatggggctctggcctatgcccggctcagccatctctccgat cctaagaatgtcttcaatcctgagaccttcaagccagggaacactcacaagtgtagaatc atcgactacagccaaatggatgaactggctttgctgtctctgcggacgtctgttattgaa gctcagtatcttagatatcatgacattaaacctggggcattggtaaagggcacggtactg accataaagccatatgggatgctggtgaaggtgggtgagcaaatcaggggcctggtacct cccatgcacctggctgacatcctgatgaagaatccagagaagaagtaccgcactggggat gaggtcaagtgtcgggttctgctttgtgaccctgaagccaggaagctgatgatgaccctg aagaaaaccctggttgagtccaaactacctgccattacctgctatgctgatgccaagcct ggtctgcagacacacggctttatcctcagggtcaaggactatggctgcattgtgaagttc tacaatgatgtgcagggactagtgcccaagcatgagctcagtgccgagtatgtccctgac ccagagagggtcttttacgctggccaggtggtgaaggtggtggtgctgaactgtgagccg tccaaggagaggatgctgttgtccttcaagctgttgagtgattcaaagaaagagtgtgct ggacacaatcagaagaaaagaagagctgttaatgttgggcagttgatggacgtgaaggtg ttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacattcctgctttt ctccccacacctcatctgtcagaccatgttgccaacggcccactgttgtatcactggctc caggctggcgacaccctgcacagagtcctgtgtctgagccagagtgagagacatgttctc ctttgcaggaaaccagctttggtctccacagtagaaggtggccaggatcccaagagcttc tcagaaatccatcctggaatgctgctcatcggttttgtgaagagcatcaaggactatggt gtgttcgtccagttcccctcaggtcttagtggactggcccccaaagctatcatgagtgac aagtttgtgacctccacaagtgaccactttgtcgaggggcagacagtggttgcgaaggtg accaacgtggacgaggagaagcagcggatgctcctgtcactgcggctctcggactgcacc ctgggggacctggctaccaccagcctcctcctcctgagccagtgcctagaggagcggcag ggtgtgcgcagcctcatgagcaaccgagactctgtgttgatccagacgctggctgagatg accccgggaatggtccttgacttggaggtacaggaagtgttggaagatggctctgtgctg ttcagtgagggcccagtgcctggcctggtcctgagagccaacagatatcatcgggcaggg caggaggtagaatctgggcagaaaaagaaggctgtcatcttaaatgttgatatgttgaag ttggaagtacacgtttccctttgccacgatttggtgaatagaaaagctaaaaagctgaag aaaggcagcgaacaccaggcgattgtgcagcacctggaggagtcctttgccgttgcctct ttagtagaaactggccacctggcagctttctccctgacctctcacctcaatgacaccttc cgctttgactcagagaagttgcacgtgggacagggtgtctccctaaccctcaagaccaca gaaccaggagtgactggtcttctcttggctgttgaggggccagctgctaagaggaccatg agacagacccgaaaggactctgaggcagtcgacgaggatgaggaagtggatgcaactctg gttgtggggactgtgaagaaacataccctgtccattggggacatggtcacagggactgtc aagtccattaagcccacccatgtggttgtgaccctggcagatggcatcattggctgtatc catgcctcccacattctagatgatgttccagcgggcacttctcctactgccaagctgaaa gttgggaagaccgtcactgcccgagtgattggtgggcgagacgtgaagaccttcaagttt ctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgttcggccaagc gagctggagaaggatggccacaccgctctcaacacgcactctgtcagccccttggagaag attaaacagtaccaggctggtcagaccgtgacttgcttcttgaagaagtacaatgtggtt aagaaatggcttgaggtggagattgctccggacatccgggggagaattcccttgttgctc acttctctcagcttcaaggttctgaaacatccagataagaagttccggattggccaggcc ctgaaggccaccgtggttaacccagattcttccaaggctttcttgtgtctctcgctcata ggtcctcacaatctcgagaaaggggaagtggccatgggccgagtggtgaaggtgactccc aagaaggggctgactgtttccttcccctttgggaagatcggaagagtcagcatatttcac gtgagtgactcctactcggagacgcccctggaagacttcaccccgcagaaggttgtcagg tgttatgtcctgtccactgcaggccatgtattgactttgtccctgcgatcgtccaggaca aacccggagacaaaaagcaaaatagcagatcctgagattaactccctgaaggacattcgg gaagggcagctgctgaggggctatgtgaagtccgtccagccgcacggtgtgctctttggc cttggcccctcagttgtgggtttggcccagtacccgcatgtctcccagtacagcccgacc gagaaagccctttataacagacacctccccgaagggaagctgctcacagccaaggtcctg agcctgaaccaccagaagaacctggtagagctgtcgttcctcccgggtgacactgggaag ccggacgtgtttcccgcctccctaggactgctgcttctgaagccagaggagaggagaata gaggcagaggtagaccgcgaaggagaggaggagaggaagaagaatcagaaaaggaaagag aagaggagccagaaggggcaggaggaggcgcagctatccagcaagaagaaagagccccag aaaccacaagcgaagaagcagggcaagcggctgcgcctggagtctggaagtggacaggag agagtgaacaagaagcaaaagaaagccgctccatcagagggagacgacagtggtgtcgag gtgtattatcgggaaggagaagaggagatagaagagacaagtgtgctgcccaaggggaag ccgaccaggccagcagaagtgccccggctgcagctgtcttctggctttgtttgggatgtg gggctagactctctgaccccggccttgccacttcgaggagagagctccgacagcgaggag gacgagaagccacagcaatccatgcagaagaagaaaagcaagaaggaaagggaattggag aagcagaaggcagagaaagagctgtcccgcatcgaggaggccctgatggatcccgggcga cagccagagtcagcagatgattttgaccgactcgtgctgagctcccccaacagctccatc ctgtggctgcagtacatggccttccacctgcaggccacggagatcgagaaggcccgggct gtggctgagagggctctcaagactatttccttcagagaggagcaggagaagctgaacgtg tgggtggcactgctgaacctagaaaacatgtacggctctcaggagtcactgaccaaggtc ttcgagcgggccgtgcagtacaacgagcctctcaaggtctttctccacctggctgacatc tacaccaagtcagagaaattccaggaagctggtgaactctacaatcggatgctgaagcgt ttccggcaggagaaagctgtctggatcaaatatggtgcctttcttctgcggaggggccag gctggggccagtcaccgtgtgatgcagcgagccctcgagtgcctgcccgttaaagagcac gtggatgtgattgccaagtttgcccagcttgagttccagctgggggatgcagagcgggcc aaagccatttttgagaacacgctaagcacctacccaaagcgcacggatgtctggtcggtc tacatcgacatgatcatcaagcatggcagccagaaggaagtccgggacatcttcgagcgg gtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaagcgctacctggac tacgagaagcagcacggcactgagaaggatgtgcaggcagtcaaggcgaaggccctggag tacgtggaggccaagagctccgtgttggaggactag

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