KEGG   Equus caballus (horse): 100034221
Entry
100034221         CDS       T01058                                 
Symbol
CD44
Name
(RefSeq) CD44 antigen precursor
  KO
K06256  CD44 antigen
Organism
ecb  Equus caballus (horse)
Pathway
ecb04512  ECM-receptor interaction
ecb04640  Hematopoietic cell lineage
ecb05169  Epstein-Barr virus infection
ecb05205  Proteoglycans in cancer
ecb05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100034221 (CD44)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100034221 (CD44)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100034221 (CD44)
   05205 Proteoglycans in cancer
    100034221 (CD44)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100034221 (CD44)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecb04147]
    100034221 (CD44)
   04090 CD molecules [BR:ecb04090]
    100034221 (CD44)
   00535 Proteoglycans [BR:ecb00535]
    100034221 (CD44)
   00536 Glycosaminoglycan binding proteins [BR:ecb00536]
    100034221 (CD44)
Exosome [BR:ecb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100034221 (CD44)
  Exosomal proteins of other body fluids (saliva and urine)
   100034221 (CD44)
  Exosomal proteins of colorectal cancer cells
   100034221 (CD44)
  Exosomal proteins of bladder cancer cells
   100034221 (CD44)
CD molecules [BR:ecb04090]
 Proteins
  100034221 (CD44)
Proteoglycans [BR:ecb00535]
 Cell surface proteoglycans
  Others
   100034221 (CD44)
Glycosaminoglycan binding proteins [BR:ecb00536]
 Hyaluronan
  Cell surface receptors
   100034221 (CD44)
SSDB
Motif
Pfam: Xlink DUF1180
Other DBs
NCBI-GeneID: 100034221
NCBI-ProteinID: NP_001078904
Ensembl: ENSECAG00000010267
LinkDB
Position
12:1842209..1929249
AA seq 359 aa
MDKFWWRAAWGLCLVPLSLAQIDLNITCRYAGVFHVEKNGRYSISRTEAADLCKAFNSTL
PTMAQMQKALNIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFN
ASAPPEEDCTSVTDLPNAFEGPITITIVNRDGTRYTKKGEYRTNPEDINPSTPADDDVSS
GSSSERSTSGGYSIFHTHLPTTRPTQDQSSPWVSDSPEKTPTTKDRASGGRAQTTHGSET
SGHSTGSQEGGASTTSGPIRRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLV
INNGNGAVDDRKASGLNGEASRSQEMVHLVNKESSETQDQFMTADETRNLQNVDMKIGV
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggacaagttttggtggcgcgcagcctggggactctgcctcgtgccgctgagcctggcg
cagatcgatttgaacataacctgccgatacgcaggggtattccatgtggagaaaaatggc
cgctacagcatctcgcggacggaggccgcggacctgtgcaaggctttcaacagcaccctg
cccaccatggcccagatgcagaaagcgctgaacattggctttgagacctgcaggtacggg
ttcatagaagggcacgtggtcatcccccggatccaccccaactccatctgtgccgccaac
aacacgggcgtgtacatcctcacgtccaacacctctcagtacgacacctattgcttcaat
gcctcagctccgcccgaagaagactgtacctcggtcacagacctgcccaacgccttcgag
ggacccattaccataactatcgttaaccgtgatggcactcgctacaccaagaaaggcgag
tacagaactaaccctgaagacatcaaccccagcacccctgcggatgacgacgtgagcagt
gggtcctccagcgaaagaagcacttcaggaggctacagcatcttccacacccaccttcca
accactcgccccacccaagaccagagcagtccctgggtgtctgacagcccagagaagact
cccactaccaaagaccgagcctctggcgggagggcccagaccacccacggatctgaaaca
agtggacactcgactgggagtcaagaaggtggggcaagcacaacctcgggtcccatacgg
agacctcaaattccagaatggctgatcatcttggcgtccctcctggccctggctctgatt
ctcgcagtttgcattgctgtcaacagtcgaagaaggtgtggacagaagaagaagctggtg
atcaacaatggcaatggagctgtggacgacagaaaggcaagtgggctcaatggagaggcc
agcaggtctcaggagatggtgcacttggtgaacaaggagtcgtcagagacccaagaccag
tttatgacagccgacgagacacggaacctgcagaatgtggacatgaagattggggtgtag

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