Equus caballus (horse): 100037402
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Entry
100037402 CDS
T01058
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04926
Relaxin signaling pathway
ecb04933
AGE-RAGE signaling pathway in diabetic complications
ecb04974
Protein digestion and absorption
ecb05146
Amoebiasis
ecb05165
Human papillomavirus infection
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100037402 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100037402 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100037402 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100037402 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100037402 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
100037402 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100037402 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
100037402 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100037402 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
100037402 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100037402 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100037402 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100037402 (COL4A3)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100037402 (COL4A3)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100037402 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100037402
NCBI-ProteinID:
XP_023498215
Ensembl:
ENSECAG00000007376
LinkDB
All DBs
Position
6:15279408..15408961
Genome browser
AA seq
1761 aa
AA seq
DB search
MPRSEGHSLVSRKGGERGRDLSHFFPPLEPQSKASVGRARQRAEPYKTRPGPAGEASFPA
GLPNPRRAGDAVAGEPASPWTRRGSERAPTMRPRTAPRPPALLLPLVLALLAAAPAAGKG
CVCKGKGQCFCDGTKGEKGEKGFPGPPGSPGQKGFPGPEGLPGPEGPKGSPGLPGLTGPK
GVRGITGLPGFSGPPGLPGTPGHPGPYGLAGLPGCNGSKGEQGFPGLPGTPGYPGIPGAV
GLKGEKGAPAEGEGIELDRKGDPGLPGTPGFQGLPGLPGFPGPAGPPGPPGFFGFPGIMG
PPGPKGHMGDNVIGQKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGTMGKS
GPPGLSGPPGESYGSEKGAPGEPGPQGKPGKEGAPGFPGTQGAKGNRGFPGLTGEDGIKG
WKGDIGPPGFRGPTEYYDAYQEKGDEGIPGPPGPKGARGPQGPSGPPGVPGSPGSSRPGL
RGVPGSPGMKGSKGEQGPPGKDAVGPPGSPGCPGSPGPPGSPGPPGPPGEIIFRKGPPGD
GGLPGHVGSPGIPGVYGPKGEPGFLCTQCPYVPGPPGLPGLPGLDGVKGIPGGRGAAGIK
GSTGSPGSVGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGAPGDPGLRGHPGRKGLDGI
PGTPGVKGLPGPKGELALSGEKGAQGPPGDPGTPGSPGPVGPAGPSDYGLHGEPGPKGTQ
GVPGAPGPPGEAGPKGEFNVLTPVPGPPGFPGPPGRAGPRGPPGIPGSIGKCGDPGIPGP
DGEPGIPGIGFPGPPGPKGDRGFPGTKGSPGCPGEMGKPGLPGQPGLPGAKGEPGPAMPG
EPGIPGFPGERGISGENGEIGHPGLPGLPGFPGTGGLDGPRGDPGQSGPPGERGLPGRCT
EGPRGAQGLPGLNGLKGQQGRRGETGPKGDPGIPGLDRSGFPGEPGPPGIPGHRGVTGPP
GQKGYPGNPGFLGPPGEKGAVGMMGSPGFTGPPGPPGKPGTPGQRGSSGIPGVKGERGPP
GAKGDEGDKGASGSSQISHVLGDKGEPGLKGFAGRPGEKGSKGIPGLPGLKGLEGPPGPS
GPPGPRGDPGSTGHPGEPGPRGVPGSMGNLGVPGSKGTRGTLGLPGPPGRPGLPGIHGLP
GDKGEPGYSEGTRPGPPGPKGDPGLPGDTGKKGERGPPGAPGYLGPAGPDGVPGHPGSPG
LPGKPGPDGDLGFKGIKGFPGSPGIKGPPGPPGFPGNPGPTGVRGEQGRDGIPGPAGEKG
ETGLLGALPGPRGNPGPRGAKGDRGAPGLPGLPGRKGTVGDVGPQGPIGMTGPPGPPGFP
GAVIPGQKGNQGPPGFQGNPGEPGPPGPPGSHTEGIKGDKGFMGRPGSRGPPGTVGDMGP
PGHPGPPGTPGHPGLQGDPGFHGFPGMRGEKGNPGFLGSIGPPGRPGPKGPPGAHGDPGT
VQIISLPGSPGPPGPVGEPGMQGEPGPLGPPGKPGPCGPRGKPGKDGKPGTPGPPGEKGD
KGCKGEPGPPGADGPPGLKGKPGFSGAPATGAAMRGFIFTRHSQTTAIPSCPEGTEPLYS
GFSLLFIQGNEQAHGQDLGALGSCLQRFTTMPFLFCNINNVCNFASRNDYSYWLSTPALM
PMDMAPITGRALEPYISRCTVCEGPAIAIAIHSQTTDIPPCPHGWISLWKGFSFIMFTSA
GSEGAGQALASPGSCLEEFRASPFIECHGRGTCNYYSNSYSFWLASLNPARMFRKPIPST
VKAGELEKIISRCQVCMKRRL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggtcagagggacatagcctggtgagtcggaagggaggggaacgagggcgggac
ctgagccacttcttccctcccttggagccacagtcaaaagcctctgtggggagggccaga
cagcgggctgagccctacaaaacccgccccggaccggctggcgaggcgagcttcccagcc
gggctccccaacccgcgtcgcgcaggggacgcggtggccggagagcctgcgagtccctgg
acccgccggggctctgagcgggcgcccaccatgcgcccccggacggcgccaagaccgcct
gcgctgctgctgccgctcgtgctggcgctcctggcggcggcgcccgcagcgggcaagggc
tgtgtctgtaaaggtaaaggccagtgcttctgcgatgggaccaaaggggagaagggggag
aaaggttttcccggaccccctggctctcctggccagaaaggattcccaggtcctgaaggc
ctgcctggaccagagggacccaagggttcaccaggccttccaggactcactggtcccaaa
ggagtcaggggaataactggattgccaggattttcaggtcctcctggacttccaggcacc
ccaggccatcctggaccttatggacttgctggtttgccaggatgcaatggttctaagggt
gagcaagggtttccaggacttccggggacaccaggctacccagggatcccgggtgctgtc
ggtttgaaaggagaaaagggtgctcctgctgaaggggaagggatagaacttgaccggaaa
ggtgaccccgggttgccaggaactccaggattccagggtttgccaggccttccaggtttt
cccggacctgccggcccacctggccctccaggattctttggctttccaggaatcatggga
cctccaggacctaagggccacatgggcgacaatgtgataggacaaaaaggagaacggggt
gtgaaaggattaacaggaccccccggaccaccaggaacagtaattgtgacgctcaccggc
ccggataacagaacggacctcaagggcgagaaaggggacaagggaaccatgggaaaatcc
ggacctcctggactctcaggaccacctggagaatcttatggatctgaaaaaggtgctccc
ggagaacctggtccacagggaaaaccaggaaaagaaggtgctcctgggttccctggcact
cagggagccaaaggcaacagaggcttccctgggttaactggtgaagacggcattaagggg
tggaaaggggacattggccctccaggatttcgtggtccaacagaatattacgatgcttac
caggaaaagggagatgaaggaattccaggcccaccagggcccaaaggagctcgtggccca
cagggtcccagtggtccccccggagttcctggaagtcccgggtcatcaaggcctggcctc
agaggagtgcctggatcaccaggcatgaaaggaagtaaaggtgaacaaggacccccagga
aaggatgcagtggggccgcctgggtccccaggttgtcctggttcaccaggccctccaggg
tcaccgggacctccaggaccaccaggtgaaatcatttttcgcaaaggtccacctggagat
ggtgggcttccaggccatgtagggtctccaggaatcccaggagtctatgggcccaaaggg
gaaccaggcttcttgtgcacacagtgcccttatgtcccagggcctccgggtctcccagga
ttgccggggttagatggtgtaaaaggaatcccaggaggacgaggagcagctggcattaaa
ggaagcacggggtccccaggaagtgtgggtcttccaggatttccgggattcccaggtgct
cagggtgacccaggactcaaaggagaaaaaggcgaaactctgcagccagaaggacaagtg
ggtgccccaggggatcctgggctccgagggcatcctggaagaaagggcttggatggaatt
cctggaactccaggagtcaaaggattaccaggacctaaaggcgaactggccctgagtggt
gagaagggggcccagggtcctccaggggatcctggcacccctgggtctccaggacctgta
ggaccggctggaccatcagactatggactacacggagagcctggtccaaagggcacccaa
ggagttcctggagcccctggaccacctggagaagccggtcctaagggagaattcaatgtt
ttgacaccagtcccaggccccccaggatttccagggcccccaggccgtgctgggccccga
ggcccacctggtatccctggatccataggaaaatgtggtgatccaggtattcctgggcct
gatggtgaaccaggaattccaggaattggatttcctgggcctcctggacctaagggagac
cgaggttttccaggaacaaaaggatcaccaggttgccctggagaaatgggaaagccaggg
ttacccggacagccaggcctcccaggagccaagggagaaccaggaccagccatgcctggg
gaaccaggaataccaggttttccaggagaaagaggcatttctggggaaaatggagaaatt
ggacaccctggacttccaggtctccctggatttccaggaactggagggcttgatggacca
cgaggggatccagggcagtctggaccacccggagaaagaggactcccaggaaggtgcaca
gagggtcccaggggagcccaaggacttccaggcttaaatggattaaaagggcaacaaggc
agaagaggcgaaacagggccaaagggagacccaggtattccaggtttggataggtcagga
tttcctggagaacctggaccaccaggaataccaggtcatcgaggtgtgacgggaccacct
ggtcaaaaaggatatccaggaaatccaggatttttagggccaccaggtgaaaaaggagcg
gttgggatgatgggctctcctggattcactgggcctccggggcctcctggaaagccaggc
accccaggacagaggggcagctctggaattccaggagtaaagggcgagagagggccccca
ggagccaagggggacgaaggggacaagggagcctcagggtcttctcaaatatcccatgta
ctgggggacaaaggagaaccaggcctcaaaggatttgcaggaaggcctggtgagaaggga
agcaaaggcatcccagggttaccaggtttaaaaggactcgaagggccacctggaccatca
ggaccaccaggccccagaggagatccgggcagcactgggcatcctggagaaccaggacct
cgtggtgtgccaggaagcatggggaacctgggggtaccaggttctaaaggaacaagggga
actttgggactcccaggtccacccggaagaccaggcctcccaggtattcatggtctccca
ggagacaagggagagccaggttactcagaaggtacaaggccaggaccaccaggaccaaag
ggagatccaggattgccaggtgacacgggaaagaaaggagaaagagggccacctggtgca
cctggatatttggggcctgctggacctgacggagtccctggacatcccggaagtcctggc
ctcccaggaaagccaggtcctgatggtgatttgggatttaaaggaatcaaaggcttcccc
ggctctccaggaataaaagggcctccaggccctccaggattcccaggaaatcctggacca
acgggtgtgaggggggagcaaggacgtgatggaattcctggtccagctggagaaaaggga
gaaacggggttgctgggggcacttccaggcccaagagggaaccctggtcctcgaggggcc
aaaggagacaggggagctccaggcttgcccggtctccctggcagaaaagggacagtggga
gatgtcgggccgcaaggtcccattggcatgacaggacccccagggcccccaggttttcct
ggtgcagtcatcccaggccaaaaaggaaatcaaggtccaccaggcttccaaggaaaccca
ggtgagcctggtccccctggacctccggggagtcacacagaaggcataaaaggagacaag
ggatttatgggcaggcctggctcaagaggtccgcctggaactgtaggagacatggggcca
ccgggtcatccgggaccaccaggtaccccaggtcacccagggctccaaggcgatcctgga
ttccacggatttccaggcatgagaggtgagaagggtaatccaggatttctgggatcaatt
gggcctccagggcgacctgggccaaaaggaccacccggtgcacatggagaccctggcaca
gttcagatcatctcccttccaggaagcccagggccacctggcccagttggagaaccagga
atgcaaggagaacctgggcccctggggccaccgggaaagccaggaccctgtgggccaaga
ggtaaaccaggcaaggatggaaaaccaggaactcctggaccacctggagaaaaaggtgac
aaaggttgtaaaggagagccaggaccacccggggcagacggaccgccaggtttgaagggg
aaacctgggttctctggagcacctgccaccggagcagcaatgagaggcttcatcttcacc
cggcatagtcagaccaccgcgattccttcctgtccggaagggacggagccgctctatagt
gggttttctcttctctttatacaaggaaatgaacaagcccatggacaagacctgggagct
cttggcagctgcctgcagcgatttaccacaatgccattcttattctgtaacatcaacaat
gtatgtaatttcgcatcgcgaaacgattattcatactggctgtcaacaccagcactgatg
ccaatggacatggctccaattactggcagggccctggagccttatattagcaggtgcact
gtctgtgaaggtcctgcgattgccatagccattcacagccaaaccactgacattccccca
tgtccccatggctggatttctctctggaaaggattttctttcatcatgtttacaagtgca
ggttctgagggcgctgggcaagcactggcatctcccggatcctgcctggaggaattccga
gccagtccatttatagaatgtcacggaagaggaacgtgcaactactattcaaattcctac
agtttctggttggcttcattaaatccagcaagaatgttcagaaaacctattccatcaact
gtgaaagctggggagttagaaaagataataagtcgctgtcaagtgtgcatgaagagaaga
ctttga
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integrated database retrieval system
