Equus caballus (horse): 100049807
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Entry
100049807 CDS
T01058
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100049807 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100049807 (CNOT3)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100049807 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100049807 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
100049807
NCBI-ProteinID:
XP_023506121
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Position
10:23619947..23636917
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AA seq
755 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPSYPSGPPPAASALSTTPGNNGAPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPTGPSAAQPRPPSVQPGGGGGGSSGGSGGGSSSSNSSGGG
GAGKQNGATSYSSVVADSPAEVALSNSGGNNSSSQALGPPSGPHNPPPSTSKEPSAAAPT
GAGGVAPGSGNNAGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSTAPEIKAPE
PLSSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLG
VCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSD
TVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDE
FEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagacc
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctcacgaataccatcgacaccctaaacatgcaggtggac
cagtttgaaagtgaagtggagtcactgtcagtgcagacacgcaagaagaagggcgacaag
gatcagaagcaggaccggatcgaggggctgaagcggcacatcgagaagcaccgctaccat
gttcgcatgttggagaccatcctgcgcatgctggacaacgactccatccttgtcgacgcc
atccgcaagatcaaggacgacgtcgagtactacgtcgactcgtcccaggaccccgacttc
gaggagaatgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccctagccacagtcacatggaggatgagatcttcaaccagtcaagcagc
acgcccacctcgaccacctccagctctcccatcccgcccagcccggccaactgcaccacg
gaaaattctgaagatgacaagaagaggggacgctcgacagatagtgaagtaagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtg
ccgcccagctacccctctggccccccacctgctgcctctgccctgagcaccacccccggc
aacaacggggcccccgccccagcagcgcccccaagtgccctgggccccaaggccagcccc
gctcccagccacaactcgggcactcccgccccctacgcccaggcagtggctccgccagcc
cccactgggcccagcgccgcccagccccggccccccagcgtccagcctggtgggggaggt
ggaggcagcagtggaggcagtggaggaggcagcagcagtagtaacagcagtggaggtgga
ggcgctggcaagcagaacggtgccaccagttatagctccgtggtggcagacagcccggcg
gaggtggctctcagcaacagtgggggcaacaactccagcagccaggctctgggccctcca
tctggccctcacaacccacctcccagcacctcgaaggaacccagtgcggcagccccaaca
ggtgctgggggcgtggccccaggctcagggaacaacgcggggggacccagcctcctggtg
ccactacctgtgaaccctcccagctccccaacgcccagcttcagcgaggccaaggcagcc
ggcgccctgctcaacggacctccacaattcagcaccgccccggagatcaaggcccctgag
cctctgagctctctgaagtccatggcagagcgggcagccatcagttcgggcatcgaggac
cctgtgccgacgctgcacctgaccgaacgagacatcatcctgagcagcacgtcggctccc
ccggcctcggcccagccacccctacagctctcggaggtgaacataccgctgtcgctgggt
gtgtgtccactggggcctgtgcccctcaccaaggagcagctctaccagcaggccatggaa
gaggccgcctggcaccacatgccccacccctcagactccgagcgtatccggcagtacctg
ccccggaacccctgcccgacgcccccctaccaccaccagatgccacccccacactcggac
accgtggagttctaccagcgcctgtcgactgagacgctcttcttcatcttctactatctg
gagggcactaaggcgcagtacctggcagccaaggccctaaagaagcagtcgtggcgattc
cacaccaagtacatgatgtggttccagaggcatgaggagcccaagaccatcactgatgag
ttcgagcagggcacctacatctactttgactacgagaagtggggccagcggaagaaggaa
ggcttcacctttgagtaccgctacctggaggaccgggacctccagtga
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