Equus caballus (horse): 100049944
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Entry
100049944 CDS
T01058
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ecb
Equus caballus (horse)
Pathway
ecb04360
Axon guidance
ecb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100049944 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100049944 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecb04515
]
100049944 (LRRC4C)
Cell adhesion molecules [BR:
ecb04515
]
Immunoglobulin superfamily
NGL family
100049944 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
100049944
NCBI-ProteinID:
XP_005598101
Ensembl:
ENSECAG00000022329
VGNC:
19784
UniProt:
F6YUN2
LinkDB
All DBs
Position
12:complement(5836177..6030023)
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AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccttatttgaccccctgcttgtggtgctgctggctcttcaacttcttgtggtggctggt
ctggtgcgggctcaaacctgcccttccgtctgctcctgcagcaaccagttcagcaaggtg
atctgcgttcggaaaaacctccgcgaggttccggatggcatctccaccaacactcggctg
ctgaacctccatgagaaccaaatccagatcatcaaagtgaacagcttcaagcacttgagg
cacctggaaatcctacagttgagtaggaatcatattagaacaattgaaattggggccttc
aatggtctggcgaacctcaacactctggaactctttgacaatcgtcttactaccatcccg
aatggagcttttgtatacttgtctaaactgaaggagctctggttgcgaaacaaccccatt
gaaagcatcccttcttatgcttttaacagaatcccttctttgcgccgactagacttaggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgaga
tatttgaaccttgccatgtgcaacctccgggaaatccctaatcttacgccgctcgtaaaa
ctcgatgagctggatctttctgggaatcatttgtctgccatcaggcctggctctttccag
ggactgatgcaccttcaaaaactgtggatgatacagtctcagattcaagtgattgaacgg
aatgcctttgataaccttcagtctctcgtggagataaacctggcacacaacaatctaaca
ttactgcctcatgacctcttcacacccttgcatcatctagagaggatacacttacatcac
aacccttggaactgcaattgtgacatactgtggctcagctggtggataaaagacatggcc
ccctccaacacagcttgttgtgcccgatgtaacactcctcccaatctgaaagggaggtac
ataggggagcttgaccagaattatttcacttgctacgctcctgtgattgtggagccccct
gcagacctcaatgtcactgaaggcatggcagctgagctgaaatgtcgggcctccacgtcc
ctgacctctgtatcttggattactccaaatggaacagtcatgacacatggtgcatacaaa
gtgcggatagctgtgctcagtgacggcacgttaaatttcacgaatgtaaccgtgcaagat
acaggcatgtacacatgtatggtgagtaattctgttggaaataccactgcttcagctacc
ctgaatgtgactgcagcaaccactactcccttctcttacttttcaaccgtcacagtagag
actatggaaccttctcaggatgaggcaaggaccacagataacaacgtgggccccactcca
gtgattgactgggagaccaccaacgtgaccacctctctcacgccacagagcacaaggtcg
acagaaaaaacattcaccatcccagtgactgatataaacagtgggatcccgggaattgat
gaggtcatgaagactaccaaaatcatcattggctgtttcgtggccatcacacttatggct
gcagtgatgctggtcattttctacaagatgaggaagcagcaccaccggcaaaaccatcac
gccccaacaaggactgttgaaatcattaatgtggatgatgagattacgggagacacaccc
atggaaagtcacctgcccatgcctgctatcgagcatgagcacctaaatcactataactcc
tacaaatctcccttcaaccacacaacaacagttaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcaaatc
taa
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