KEGG   Equus caballus (horse): 100050229
Entry
100050229         CDS       T01058                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ecb  Equus caballus (horse)
Pathway
ecb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100050229 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100050229 (CSTF1)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100050229 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_NOL10_N NBCH_WD40 Beta-prop_TEP1_C Beta-prop_VPS8 ASA1 Beta-prop_EIPR1 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_DCAF4 PAC11 CFAP251_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 DSE1_N Ge1_WD40 Beta-prop_HPS5 PROPPIN Beta-prop_WDR75_2nd Frtz DUF7099
Other DBs
NCBI-GeneID: 100050229
NCBI-ProteinID: XP_001489410
Ensembl: ENSECAG00000008949
VGNC: 16919
UniProt: F6S5J7
LinkDB
Position
22:44135453..44147942
AA seq 431 aa
MYRTKVGLRDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacaggactaaagtgggcctgagggaccgccagcagctctacaagctgatcattagc
cagctgctctacgacggctacatcagcattgctaacggcctcatcaatgagatcaagcct
cagtctgtctgtgcgccctcggagcagctcctgcatctcatcaaactaggaatggaaaat
gatgatactgcagttcagtatgcaattggtcgttcagatacagttgcccctggcacagga
attgacctggaatttgatgcagatgtccagactatgtccccagaggcttcagagtatgaa
acatgctatgtcacatcccataaaggaccctgccgggtagctacctatagtagagatgga
cagttaatagctactggatctgctgatgcttccataaagatacttgacacagaaagaatg
ttggccaaaagcgccatgcccatagaggtcatgatgaatgagactgcacaacagaatatg
gaaaaccacccagtgattcgaactctttatgaccatgtggatgaagtcacgtgtcttgct
ttccatccaacagaacagatccttgcctctggttcaagggattatactcttaaattattt
gattattccaaaccatctgcaaaaagagccttcaaatacattcaggaagctgaaatgtta
cgctccatttcttttcatccttctggagactttatacttgttgggactcagcatcctact
cttcggctttatgatatcaacacatttcaatgttttgtctcttgtaatcctcaagatcaa
cacaccgatgctatatgttctgttaattacaatcctagtgccaatatgtatgtaactggt
agcaaggacggctgcatcaaattatgggacggtgtttcaaatcgatgcatcacaactttt
gagaaagcacatgacggtgctgaagtctgttctgccattttttccaaaaattctaaatac
attctctcaagtggaaaagactctgtagctaaactttgggaaatttcaacaggacgcacg
ctggtccggtacacaggtgctggcttgagcgggcggcaggtgcaccggacgcaggctgtc
ttcaaccacacggaggactacgtgctgctgcctgatgagaggaccatcagtctctgctgc
tgggactcgcggaccgccgagcgccgaaacctgctctccctgggccacaacaacattgtg
cgctgcatcgtgcactcgcccacgaaccccggcttcatgacatgcagcgacgacttcagg
gcacggttttggtaccggagatcaaccacggactag

DBGET integrated database retrieval system