Equus caballus (horse): 100050252
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Entry
100050252 CDS
T01058
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 precursor
KO
K06527
vascular cell adhesion molecule 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04064
NF-kappa B signaling pathway
ecb04514
Cell adhesion molecules
ecb04668
TNF signaling pathway
ecb04670
Leukocyte transendothelial migration
ecb04933
AGE-RAGE signaling pathway in diabetic complications
ecb05143
African trypanosomiasis
ecb05144
Malaria
ecb05417
Lipid and atherosclerosis
ecb05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100050252 (VCAM1)
04668 TNF signaling pathway
100050252 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100050252 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100050252 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100050252 (VCAM1)
05143 African trypanosomiasis
100050252 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100050252 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100050252 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100050252 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ecb04090
]
100050252 (VCAM1)
04091 Lectins [BR:
ecb04091
]
100050252 (VCAM1)
CD molecules [BR:
ecb04090
]
Proteins
100050252 (VCAM1)
Lectins [BR:
ecb04091
]
I-type lectins (Siglecs)
100050252 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
C2-set_2
ICAM_N
Ig_5
ICAM1_3_5_D2
Ig_4
Ig_6
C1-set
Adhes-Ig_like
Receptor_2B4
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
100050252
NCBI-ProteinID:
NP_001095120
Ensembl:
ENSECAG00000016735
VGNC:
24891
UniProt:
A7LP08
LinkDB
All DBs
Position
5:complement(62204444..62223082)
Genome browser
AA seq
739 aa
AA seq
DB search
MPRKTVVIFGALNILRTVFAASQAFKIEIFPESKILAQIGDSISLTYSTTGCDSPSFSWR
TQIDSPLNGKVINEGTKSTLTLEPVGFAHEHSYLCTATCGHDKQERGVQVDLYSSPEDPE
ISFSGLLEVGKPVTVTCLVRDVYPFDRLEMHLLKGDHLMKNQEFVEDTDVKALETKSLEV
TFTPTNEDIGKTLVCGAKLHIDEIDFKLKEKETTKTLQVYISPRNTVISVNPSKRLQEGG
SVTMTCSSEGLPAPQILWSKKLDNGNLQLLSENATLTLIAMRMEDSGIYVCEGVNLAGRD
RTQVELIVQEKLFTVEISPGPQIATQIGDSVTLTCRVMGCESPSISWRTQIDSPLSGKVR
TEGTKSTLTLSPVSFENEHSYLCIVTCGHKKVEKEIKVDLYSFPSDPKIEMSGLLVEGNP
VNVSCKVPDVYPFDRLEIELLKGESIMKKKNFLEDVDNKSLETKSLEMTFIPTTEDTGKV
LVCQAKLHIDEMEFEPKQRQSTQTLYVNIAPRDTTISVSPSSILEEGSSVNMTCSSDGLP
APKILWRRQLNNGELQFLSENTTLTLISTKMEDSGIYVCEGINQAGKSRKEVELTIQVAP
KDIQLRAIPSESVKEGDTVIISCTCGNVPQTWIILKKKAETGDTVLKSTGGEYTIHKAQL
EDAGVYECESKNQVGLQLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIPAIGMIIYFA
RRANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagacggtcgtgatctttggagccttaaatatacttcggacggtgtttgca
gcttctcaagcttttaaaattgagatcttccctgaatccaaaattcttgctcagattggt
gactccatttcactgacttacagcacgacgggctgcgactctccatctttctcttggagg
acccagatagacagtccactgaatgggaaggtgataaacgaggggaccaaatccacactg
actctggagcctgttggtttcgcgcatgaacactcttacttgtgcacggcgacttgtgga
catgacaaacaggaaagaggagtccaggtggatctctactcttcccctgaggacccagag
atcagtttcagtggtcttctggaggttgggaagccggtcacggtcacatgtttggtccga
gatgtttacccatttgacaggctggagatgcatttactcaagggtgaccatctcatgaag
aatcaggaatttgtagaggatacggatgtcaaggccttggaaaccaagagtttggaagta
acctttactcctaccaatgaggatattggaaaaactcttgtttgtggagctaaattacac
attgatgaaattgattttaagctcaaagaaaaggagactacaaaaacattacaagtctac
atctcacccaggaacacagttatctctgtgaatccctccaaaaggctgcaggaaggtggc
tccgtgacaatgacatgttccagtgaaggtctaccagctccacagattctctggagcaag
aagttagataatgggaatctacagcttctttctgagaacgcaactctcactttaattgct
atgaggatggaagattctggaatttatgtgtgtgaaggagttaatctggctggaagagac
agaacacaggtggaattaattgttcaggagaaactgtttactgttgagatctcccctgga
ccccagattgctactcagattggtgactcagtcacgttgacatgtcgtgtcatgggctgc
gagtccccatctatctcttggagaacccagatagacagccctctgagtgggaaggtgagg
actgaggggaccaagtccacactgaccctgagccctgtgagttttgagaatgaacattct
tacctgtgcatcgtgacctgtgggcataagaaagtggaaaaggaaattaaggtggacctc
tactcgttccctagtgatccaaaaattgagatgagtggtctgctagtggagggaaaccca
gtcaatgtaagctgcaaagttcctgacgtgtatccatttgaccggctggagattgaatta
ctcaagggggagagtattatgaagaaaaaaaactttttggaggatgtggataataaatcc
ctagagaccaagagtctggaaatgaccttcatccccaccactgaagatactggaaaagtt
cttgtttgtcaggctaagttacatattgatgaaatggaatttgaacccaaacaaaggcag
agtacacagacactttatgttaacattgcccctagagatacaaccatctcggtcagcccc
tcctccatcctcgaggaaggtagttccgtgaatatgacatgctctagcgatggccttcca
gctccaaaaatcctgtggagaaggcagctgaataatggggagctacagtttctttctgag
aatacaactctcaccttaatttctacaaaaatggaagattctggtatttatgtgtgtgaa
gggattaaccaggctggaaaaagcagaaaagaagtggaattaactattcaagttgctcca
aaagacatacaacttagagctattccttctgagagtgtcaaggaaggagacactgttatt
atctcctgtacatgtggaaatgttccccaaacttggataatcctgaagaaaaaagcagag
acaggagacacagtactaaagtccacaggtggtgaatataccatccacaaggcccagtta
gaggatgcgggagtatacgagtgtgaatctaaaaaccaagttggcttgcaattaagaagt
ctaacacttgatgttaaaggaagagagaataacaaggactatttttcccctgaacttctc
gtgctgtattgtgcatcctccttaataatacctgccattggaatgatcatttactttgca
agaagagccaacatgaaagggtcatacagtcttgtagaagcacagaagtcaaaagtgtag
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