Equus caballus (horse): 100050303
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Entry
100050303 CDS
T01058
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X3
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ecb
Equus caballus (horse)
Pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100050303 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100050303 (PRPF4)
Spliceosome [BR:
ecb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100050303 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
100050303
NCBI-ProteinID:
XP_001488913
Ensembl:
ENSECAG00000007072
VGNC:
21886
UniProt:
F7CKR6
LinkDB
All DBs
Position
25:18616414..18632409
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AA seq
521 aa
AA seq
DB search
MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacgcgcctcctccacggcaaccaaaaccaaggcacccgatgacttggtg
gctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagcgggaattgaa
gcaggaaatattaacataacctctggagaagtgtttgaaattgaagagcacatcagtgag
cgacaggccgaagtattagctgagtttgaaagaaggaagcgagcccggcagatcaatgtt
tctacggatgactcagaggtcaaggcttgccttagagccttgggcgagcccatcacgctt
tttggagaggggcctgctgagagaagagaaaggttaagaaatatcctctcagtagtcggt
actgatgccttaaaaaagaccaaaaaagatgatgagaaatctaagaagtccaaagaagag
tatcagcaaacctggtaccatgaaggaccaaacagcctgaaggttgctagactgtggatt
gctaattattcactgcccagagccatgaaacgcttggaagaggcccgtctccacaaagag
attcctgagacaactaggacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcctactgccactttagtccc
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttcct
gattgcaaccttcttcacactctccgaggccataacacaaacgtaggagcaattgtattc
catccgaaatccactgtctccttggaccaaaaagatgtcaatctggcctcctgtgctgct
gatggctctgtgaagctttggagccttgacagtgatgaaccagtggcggatattgaaggc
catacagtgcgcgtggcccgtgtaatgtggcatccatcaggacggttcttgggcaccacc
tgctatgaccgctcatggcgcttatgggatttggaggctcaagaggagatcctgcatcag
gaaggtcacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgagtttgggacctgcgcacaggacgttgtatcatg
ttcctagaaggccacctgaaggaaatctatggaataaatttctcccccaatggctaccac
attgcgactggcagtggtgacaacacctgcaaagtgtgggaccttcgacagcggcgttgc
gtctataccatccctgcacatcagaacttggtgactggcgtcaagtttgagcctatccat
gggaatttcttgctcactggtgcctatgataacacagccaagatctggacccaccccggc
tggtccccgctgaagactctggccggccatgaaggcaaagtgatgggcctagacatttct
tccgatgggcagctcatagccacgtgctcatatgacaggaccttcaagctctggatggct
gaatag
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