Equus caballus (horse): 100050424
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Entry
100050424 CDS
T01058
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100050424 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100050424 (XPC)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100050424 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
zf-B_box
Motif
Other DBs
NCBI-GeneID:
100050424
NCBI-ProteinID:
XP_023475669
Ensembl:
ENSECAG00000015499
VGNC:
25071
UniProt:
F6VJR1
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All DBs
Position
16:complement(4476855..4510340)
Genome browser
AA seq
943 aa
AA seq
DB search
MARKRAAGSGRRGREPRGQKAKGESAARREQKEADVFEDEKPPKKKLLSKVSRGKRKRGC
SDPGGSADGPAKKKVAKVTGKSEKLKVIKDEALSDEDFRDSPSARKKARRPKKEAAMDKG
SHGGDDEEESEDDWEEVEELSEPVPGDAGENTAFSKSALPVEPVEIEIETPEQAKARERS
EKVKMEFETYLRRMVKRFNKEVHEDTHKVHLLCLLANGFYRNSVCNQPDLQAIALSILPA
RFTRVPPRDVDICHLSDLVKWFIGTFTVNADLSTSERDGLQTTLERRFAIYSARDDQELV
HIFLLILRALQLPTRLVLSLQPIPLKLSAAKGKKPSKERSTEGPRGSSETSSQVPENQTK
PKTSRGTRQEETSSEGTSNPGTKGKRSKPAAGGRRRRDPSSSGEEEGEAGAREEHTPRRL
RGRERRVASRVSYKEESGSDKAGSGSDFELSSEEAQHSSDEDSEPGLPRRRRARAPQRTK
TESKSDSRTQHGRHPKNPGFPATSSSSSSSKSKRGKKIHHEGEEAEGGKAAGVDQWLEVF
CEQEEKWMCVDCVHGVVGQPLTCYRYATKPMTYVVGIDSDGWVRDVTQRYDPAWMTVTRK
CRVDAQWWASTLRPYQSPCVEREKKEDLEFQAKHLDQPLPTAIGTYKNHPLYALKRHLLK
FEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRAR
KARLAEPQLQDQNDLGLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLN
LPNLHRVARKLDIDCVQAVTGFDFHGGYCHPVTDGYIVCEEYKDVLLAAWEKEQALIEKK
EKEKKEKRALGNWKLLVKGLLIRERLRLRYGAKCEAAAPHADAGGGLSSDEEEGTSSQAE
AARILAASWPQNREAEEEPKPKCPKTKRGKKAAASHLFPFERL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggctaggaagcgcgcagccggcagcgggcggcgggggcgcgagccgcgcggccagaag
gccaaaggcgagagcgcggcccggcgtgagcagaaggaggcggatgtctttgaagatgag
aaacccccaaagaagaagctgctctcgaaagtctcgcgaggaaagaggaagaggggctgc
agtgatcctgggggctcagcagatggtccagcaaaaaagaaagtggccaaggtgactggt
aaatcggaaaagctcaaggttataaaggatgaagccctcagtgatgaagatttcagggat
tctccaagtgcccgcaagaaggcacgccgtcctaagaaagaggctgccatggacaaaggc
agccatggaggagacgacgaggaggaaagtgaagatgactgggaagaggtagaagaactt
agtgagcctgtgccaggggatgcaggagaaaacacagccttctctaagtctgctttgcct
gtggagccagtggagatagagatcgagacaccggagcaggcgaaagcaagagaaagaagt
gaaaaggtgaaaatggagtttgagacgtaccttcggaggatggtgaaacgtttcaataaa
gaagtccatgaagacacgcacaaggttcaccttctgtgcctgctagcaaatggcttctat
cgaaatagtgtctgcaaccagccagacctgcaggctattgccctctccatcctccccgcc
cgctttaccagagtgcctcctcgcgatgtggacatctgccacctgtcagacctggtgaaa
tggttcattggaacttttacagttaatgcagacctttcaaccagtgagcgagatggccta
cagactacgctggagaggagatttgctatttactctgcgcgagatgaccaagaattggtc
cacatatttttactgattctccgggccctgcagctcccaacccggctggtattgtctctg
cagccaattcccctgaagttatcagcagcaaagggaaagaaaccttccaaggagagatcc
acagagggtcccagaggctcctcagaaacttccagccaagttccagaaaaccaaaccaaa
ccaaagaccagcagaggaaccagacaagaggaaacctcttcagagggcactagcaatcca
ggcaccaaagggaagaggagcaagccagcagcaggtggacggagacggagggacccctcc
tccagtggggaagaggagggagaggcgggggcgcgggaggagcacaccccgagacgtctg
cgtggccgggagcggcgggtggcctccagggtgtcttacaaagaagagagtgggagtgac
aaggctggcagtggctctgactttgagctctccagtgaggaagcccaacattcatctgat
gaggattctgagcctggccttccgaggcggaggagggcccgggcccctcagaggacaaaa
acagagtccaagagtgactctaggacccaacatggaagacaccctaagaatcctggcttt
ccagcaacatcctcaagctcttcaagcagtaagagtaaaagaggcaagaaaattcaccat
gaaggtgaggaggctgaaggagggaaagcagctggtgtagaccagtggctggaagtgttc
tgtgagcaggaggaaaagtggatgtgtgtggactgtgtgcacggtgtggtgggccagcct
ctaacctgttacagatatgctaccaaacccatgacctacgtcgtgggcatcgacagtgat
ggctgggtccgggatgtcacccagaggtacgacccagcctggatgacagtgacccgcaag
tgccgggttgacgcccagtggtgggccagcaccttgagaccataccagagcccgtgtgtg
gaaagggaaaagaaagaagacttggagtttcaggcgaagcacctggaccagcctttgccc
actgcgattggcacgtacaagaaccaccctctgtacgccctcaagaggcacctcctgaaa
ttcgaggccatctatcccgagacggccgccatcctcgggtattgtcgcggagaagctgtc
tactccagggactgcgtgcacaccctgcactccagggacacgtggctgaaacaagcaagg
gtggtgaggcttggagaagtgccctacaagatggtgaaaggcttttctaaccgggcccgg
aaagcccgccttgctgagccccagctgcaggaccaaaatgacctaggcctgtttggccag
tggcagacagaggagtaccagccgcctgtggctgttgacgggaaggtcccccggaatgaa
tttgggaacgtgtacctcttcctgcccagcatgatgcctgtcggctgtgtccaactgaac
ctgcccaatctgcaccgtgtggcccgcaagctggacatcgactgtgtccaggccgtcact
ggcttcgatttccatggaggctactgccatcccgtaactgacgggtacatagtctgcgag
gaatacaaagacgtgctcctggccgcctgggaaaaagagcaggcgctcattgaaaagaag
gagaaggagaaaaaggagaagcgggccctagggaactggaagctgctggtcaaagggctg
ctgatcagggagaggctgaggcttcgctacggggccaagtgtgaggcagcagctccccat
gcagatgcaggaggtggactctcttctgacgaagaggaggggaccagctctcaagcggaa
gcggccaggatcctggctgcctcctggccccaaaaccgagaggccgaagaagagccgaag
ccgaagtgccccaagaccaaaaggggaaagaaggcggcggcttcccacctcttcccattt
gagaggctgtga
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