Equus caballus (horse): 100050460
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Entry
100050460 CDS
T01058
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecb03016
]
100050460 (TRMT13)
Enzymes [BR:
ecb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
100050460 (TRMT13)
Transfer RNA biogenesis [BR:
ecb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100050460 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
100050460
NCBI-ProteinID:
XP_001488839
Ensembl:
ENSECAG00000022626
VGNC:
24538
LinkDB
All DBs
Position
5:complement(62683346..62716180)
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AA seq
481 aa
AA seq
DB search
MAASAPTPHATGFPAEGRCGYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPVSSLSEEQLE
NLIKKLRKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPVLSKEKLPVVGIGKHLCGMATDLALRCLVETYAASCEERNEEPLAKRIK
NDKTEKEINTLAKEGNEKNVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFKALGLGAVE
FHYFQRMSSWATCGMRKTSLEASNSTPVRKDNQNDDSEEHDDGRYRITEDSAESLPGFLT
VEEKKKLGHLCKLLIDQGRIEYLQQKGFRPALQYYTDPLVSLENVLLTALPKHSSLPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgccgacgccgcacgcgactggctttccagctgagggtcgatgcggt
tactatgtggaaaagaagaagcggttctgcaggatggtggtggcagcagggaagaggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcggaaaagaatcctctgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaagcatttgaaaaaatgtaac
tcaagagagaagccaaaacctgacttctttattcaagatattaatgcaggcttaaaagat
gagacggaaatacctgaacagttagttccagtttcttctctctctgaagagcagttggaa
aatttaattaagaaattgagaaaagcaagtgaaggtttgaactctacacttaaagatcaa
attatgtcccatccagcattgcatgatgcccttaatgaccctaaaaatggtgattctgca
accaaacacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccaca
agattcaaggtggatggcaaacacagaaagaaaaattcagtgtttgaaagacttcaaatt
gatattcaacacttgtgtttaaacaagattcctgtgctaagcaaagaaaaactacctgtg
gtgggaattgggaagcatctgtgtggtatggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacagagaaagaaattaacactttggccaaggaaggaaatgaaaaaaatgtc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcaaggctctaggccttggagcagtggaa
ttccactatttccagcgaatgagtagttgggcaacttgtggaatgcggaaaacatctttg
gaagcctcaaatagtaccccagtgagaaaagataatcagaatgatgacagtgaagagcat
gatgatgggagatacagaatcacagaggacagcgctgagagtttgcctgggtttcttact
gttgaagaaaagaagaaactagggcatctttgtaaattgctgattgaccaaggccgaatc
gagtatttacagcagaagggattccgtcccgctcttcagtactatacagatcctttggtg
tctttggaaaatgtattgttgactgctttaccaaaacattcttcattaccagagacaact
gcttaa
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