Equus caballus (horse): 100050615
Help
Entry
100050615 CDS
T01058
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100050615 (SMARCAL1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100050615 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
OmpA
Motif
Other DBs
NCBI-GeneID:
100050615
NCBI-ProteinID:
XP_001490055
Ensembl:
ENSECAG00000007683
VGNC:
23322
LinkDB
All DBs
Position
6:6172238..6225833
Genome browser
AA seq
948 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRAGVGSSFAAQPAQSKQSSSQNVPRD
PSKPGSHGVIFKQQNPSTSSNGDRRPYNSHSCHPSTPEQAKGTWKRQEEMPTACPSHSPP
SQTTLTGISPPLAQSPPQVPSQQLLDCELGQGPPQASQETKWTPFANTTPKPLAKARSFQ
KTPAPFSGQPPRDPELGANMMSPSTSRQHIPDIPCGSGSVAPGTEGGLPQKLGASLHKAV
SSQNGVCVRNGDRFQVKIGYNAELIAVFKSLPSRSYDPATKTWNFSMTDYSTLMKAAQRL
PKVTLQPLEGAEGSVAQTHLPSAPSLGFVKGRCVLISRARFEADIGYSEDLIALFKQMDS
RNYDVQTKKWNFLLEEHSKLIERVRCLPQVRLDPLPTTLLLAFASQLEQTSLRPAADIPE
ADLSGVDPKLVSNLLPFQRAGVNFAVAKGGRLLLADDMGLGKTIQAICVAAFYRKEWPLL
VVVPSSVRFTWEQAFLQWLPSLSPDHINVVVTGKDHLTAGLVNIVSFDLLSKLEKQLKQL
KSPFKVVIIDESHFLKNSKTARCRAATPLLKVANRVILLSGTPAMSRPAELYTQILAVKP
TFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR
KMVVVAPGRINAKARASLDAAAKEMTTKNKTKQQQKEALILFFNRTAEAKIPCVIEYILD
LLESGREKFLVFAHHKVVLDAITKELERKHVQHIRIDGATSSADREALCQQFQLSERHAV
AVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQSRSVGIHYLVARGTAD
DYLWPLIQEKIKILSEAGLSETKFSEMTEATDYLYKDPKQQKIYDLFQKSFEEDGSDMEL
LEAVESFDPGSGSQDTEDTLDESTLTGSPLKKRRFEFFDNWDSFTSPL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaaaattgaagagaatcgacagaaggct
ctggcccgtagggctgagaaattattagcagaacaacatcagagagcaggcgtgggctct
tcctttgctgcccagcctgcccagtccaagcagagctcttcccagaatgtccccagggat
ccttccaagccaggaagccatggtgtcattttcaagcagcagaatcccagtacttcttct
aatggtgaccgaagaccttataattcccacagttgtcatcccagcactccagagcaggca
aaggggacgtggaagaggcaagaagagatgcccacagcctgcccaagtcacagcccccca
agtcaaacgactctcactgggatctcccctcccttggcacaaagtcctccacaggtgccc
agccaacagctcttggattgtgagttaggtcaaggtcctcctcaggcttcacaggagacc
aaatggacaccttttgcgaacacgactcctaagcctttggccaaagcaaggagtttccag
aagacaccagctcctttctctggacagcctcccagggatcctgaattaggggccaatatg
atgagtccttccacctcgaggcagcatattcctgacatcccctgtggctcagggagcgtg
gcccccggaacggaaggaggactcccacagaaattgggggcctcgctccacaaagcagtg
agctcccagaatggggtgtgcgtgaggaatggggaccgtttccaggtgaagatcgggtac
aatgcggagctcatcgcagtgtttaagagtctacccagcagaagttatgatcctgccact
aagacgtggaacttcagcatgaccgactacagtaccctgatgaaagcagcccagcgcctc
cccaaggtcaccctgcagcctttggaaggggccgagggcagtgtggcgcagacccacctc
ccttcagccccctcgcttggctttgtcaaagggcgatgcgtgctcatctcccgggcccgc
ttcgaagcagacatcggctattcagaagacctgattgcactgtttaaacagatggattcc
agaaattatgatgtccagaccaagaagtggaactttctgttggaagagcacagtaaacta
attgagagggtgcgctgccttccgcaagttcggctggatcctctgcccacgacactcctc
ctggcgtttgcttctcagctcgagcagacgtctctgcgtcccgcagccgacatccctgag
gccgacctttctggagtggaccccaagctcgtgtcgaacctgctgccctttcagagagct
ggagtcaattttgctgtagcaaagggaggccgcctgttgctcgccgacgacatgggcctg
gggaagaccatccaagccatctgcgtcgcggccttctaccggaaggagtggccactcctg
gtggtggtgccgtcctctgtgcgcttcacctgggagcaggccttccttcagtggctgccg
tctctgagcccagaccacatcaatgtcgtggtgaccggcaaggaccacctgacggctggt
ttggtcaacattgtcagttttgaccttctgagcaagttggaaaaacagctaaaacagcta
aaaagtccttttaaagttgtcatcattgatgagtctcacttcctcaaaaacagtaagacc
gcccgctgtcgcgcagccactcccctcctcaaggtggccaaccgggtgatcttactgtcg
ggcacgccagccatgtcccggcctgcagagctctacacacagatccttgcggtcaagcca
actttcttccctcagtttcatgcctttggacttcgctactgtgacgccaagcggatgccc
tggggctgggactactcaggctcctccaaccttggggagctgaagctcctgctggaggag
gcggtcatgctgcgccgcctcaaatccgacgtcctttcccagcttccagccaagcagcgc
aagatggtggtggttgccccgggccggatcaacgccaaggccagagcttccctggacgcg
gcggccaaggagatgaccaccaagaacaagactaaacagcagcaaaaggaggctctcatt
ctcttcttcaacagaacagctgaggctaaaattccatgcgtcattgaatatatcctggac
ctcctggaaagtggaagagagaagtttctagtgtttgcacaccataaggtggttctggat
gcaattactaaagagcttgagagaaagcacgtgcagcacatccgcatcgatggcgccacc
tcctccgcagaccgagaggctctgtgccagcagttccagctgtccgagaggcacgccgtc
gccgtgctgtccatcaccgctgccaacatgggcctcaccttctcctcggcggacctggtg
gtgttcgctgaactgttttggaacccaggggtgctgatccaggctgaggaccgggtgcac
cgcatcggacagtcgagatctgtgggcatccactacctcgtggcgagaggcacagctgac
gactacctttggcccctgattcaagagaagattaaaattctgagtgaagccgggctttct
gagactaagttttcagaaatgacagaagccaccgattacctctacaaggacccaaagcag
caaaagatctatgacctattccagaagtcctttgaggaagatggaagtgacatggagctc
ctggaggcagtggagtcctttgaccccggaagtggttctcaggacacagaagacaccctg
gatgaaagcacgttgacgggcagtccactgaagaaaaggaggtttgaattttttgataac
tgggacagcttcacctctcccctataa
DBGET
integrated database retrieval system
