Equus caballus (horse): 100050655
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Entry
100050655 CDS
T01058
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100050655 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100050655 (PARN)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100050655 (PARN)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100050655 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Thc1_RRM
NCBP3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100050655
NCBI-ProteinID:
XP_001490195
VGNC:
51216
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All DBs
Position
13:31607525..31755672
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AA seq
637 aa
AA seq
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MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPPVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCAFKYDYTDSKYITKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDHVIEKIEDLLQSEEDKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGTFLSPPKTHVSARSKLVEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEKQIKRKWTEDGWKEVERKRLNT
QCASYALQNHYHHANSLTATGTVGKRTLSPSRAEAGLEARVSEELSDAELEQTDSCAESL
SEGRKKAKKLKRMKKDLSPAGSLSDSSAKLFEVPDTW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcataaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggacctccagtc
actgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaaacat
tccatggactttttgctgtttcagtttggcctttgcgcttttaagtatgactacacagat
tcaaagtatataacaaagtcgtttaacttctatgttttcccgaaacccttcagtagatcc
tcaccagatgtcaaatttgtttgtcagagctcgagcattgactttctagcaagccaagga
tttgatttcaataaagtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaatggtgcaggagctctatcc
tatgtgtctcctaacacttcaaagtgtcccgtgacgattcctgaggatcagaagaagttc
attgaccacgtgatagagaaaatagaagatttattgcagagtgaagaggacaagaacttg
gatttagagccgtgtactgggttccaaagaaaactgatttatcagactttgagctggaag
taccccaaaggcattcatgttgagactttagaaactgaaaagaaagagcgatatattgtt
attagcaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgctaaagaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggatgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacttaaatgagtttaaggagatgacaacgtgtgttttcccc
agacttttggataccaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcggttaaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacagcttctgaacagctccacgaggcaggc
tatgacgcttatatcacaggactgtgtttcatctccatggcaaactacctaggtactttt
cttagtcctccaaaaactcatgtgtctgccagatcaaaactcgttgaacccttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
caacctaaacgcgatcacgttctccacgtgacattccccaaagaatggaaaaccagcgac
ctttaccagctttttagtgcctttggtaacattcagatatcctggattgatgacacgtca
gcatttgtttccctgagccagcctgaacaagtacaaattgctgtcaataccagcaagtat
gcagaaagctatcgcatccagacctatgctgagtacgtggggaaaaaacacgagaagcag
atcaagagaaagtggacagaagatggttggaaggaggttgagagaaagcggttaaatacc
cagtgcgcatcctatgctctgcagaatcactatcaccacgccaacagtcttacagctacc
ggcacagtaggaaagagaaccctgagtcccagtagagcagaagctggcttggaggccaga
gtatcggaggagctttctgacgctgagcttgagcagacagattcctgtgcagaatccctc
tcagagggaaggaaaaaggccaagaaattgaaaagaatgaagaaagacctttctccagca
ggaagcctgtcggacagctctgccaagctctttgaagttcctgacacgtggtaa
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