KEGG   Equus caballus (horse): 100050734
Entry
100050734         CDS       T01058                                 
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13
  KO
K08331  autophagy-related protein 13
Organism
ecb  Equus caballus (horse)
Pathway
ecb04136  Autophagy - other
ecb04140  Autophagy - animal
ecb04211  Longevity regulating pathway
ecb05010  Alzheimer disease
ecb05014  Amyotrophic lateral sclerosis
ecb05016  Huntington disease
ecb05017  Spinocerebellar ataxia
ecb05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100050734 (ATG13)
   04136 Autophagy - other
    100050734 (ATG13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    100050734 (ATG13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100050734 (ATG13)
   05014 Amyotrophic lateral sclerosis
    100050734 (ATG13)
   05016 Huntington disease
    100050734 (ATG13)
   05017 Spinocerebellar ataxia
    100050734 (ATG13)
   05022 Pathways of neurodegeneration - multiple diseases
    100050734 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecb04131]
    100050734 (ATG13)
   03029 Mitochondrial biogenesis [BR:ecb03029]
    100050734 (ATG13)
Membrane trafficking [BR:ecb04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    100050734 (ATG13)
   Atg1 complex
    100050734 (ATG13)
Mitochondrial biogenesis [BR:ecb03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    100050734 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 100050734
NCBI-ProteinID: NP_001229458
Ensembl: ENSECAG00000024606
VGNC: 15618
UniProt: F6QAI1
LinkDB
Position
12:11240019..11281783
AA seq 480 aa
METDLNSQDRKDLDKFIKFFALKTVQAIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTVTLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPTHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPNQPALGAQADQERLATYTPSDGA
HCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMF
APKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gccctcaagactgtccaagcgattgtccaggctcgacttggcgagaagatttgtactcgt
tcatcttcatccccaacgggctcagactggttcaatttagccatcaaagacatcccggag
gtcacacatgaagccaagaaggcactggcggggcagctgcctgccgttggcagatctatg
tgcgtggagatctccctcaagacttctgagggagattccatggagctagaaatctggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacggtgtacaacaga
ctgtcgttgctgctgaagtctcttcttgctataactagggtgacacctgcttacagactc
tccagaaaacaggggcacgaatatgtcatattgtacagaatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagtccgtgtggggactgtgggcacccctgtg
ggcaccgtcactctttcttgcgcttacagaattaacttggcgttcatgtccaccaggcaa
tttgagaggaccccccccatcatggggatcatcatcgatcactttgtggaccgcccctat
cccagctcctcgcccacgcacccctgcaattacagaaccgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacttctttttccacctcccct
ccatcccagctaatggttcccgggaaggaaggcggggtaccccttgctcccaaccagcct
gccctgggtgcccaggccgaccaggagagattggcaacctacaccccttctgacggggcc
cactgtgctgccacaccttccagcagcgaggacacggaaactgtatcaaacagcagtgag
ggacgggcctccccacacgacgtcttggagaccatctttgtccgaaaagtgggggctttt
gtcaacaaacccatcaaccaggtgaccctgaccagtttggacataccctttgccatgttt
gctcccaagaatttggagctggaggatgccgatcccatggtgaatcctccagattcccca
gagactgagtctcctctccaaggcagcctgcactctgatggctccagcgggggcagcagt
ggcaacactcatgacgactttgttatgattgacttcaaaccggctttttctaaagatgac
attcttccgatggacttggggaccttctatcgtgaatttcagaacccccctcagctgagc
agcctctccatagatattggggcccagtcaatggccgaggacttggactcgctaccagag
aagctggctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaaccctgcag
taa

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