Equus caballus (horse): 100050741
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Entry
100050741 CDS
T01058
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X2
KO
K12200
programmed cell death 6-interacting protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03250
Viral life cycle - HIV-1
ecb03272
Virion - Hepatitis viruses
ecb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100050741 (PDCD6IP)
03272 Virion - Hepatitis viruses
100050741 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100050741 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100050741 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100050741 (PDCD6IP)
Membrane trafficking [BR:
ecb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100050741 (PDCD6IP)
Exosome [BR:
ecb04147
]
Exosomal proteins
Proteins found in most exosomes
100050741 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
TINF2_N
Ly49
Motif
Other DBs
NCBI-GeneID:
100050741
NCBI-ProteinID:
XP_001490025
Ensembl:
ENSECAG00000004691
VGNC:
21233
LinkDB
All DBs
Position
16:complement(52141912..52211963)
Genome browser
AA seq
868 aa
AA seq
DB search
MASFISVQLKKTSEVDLAKPLVKFIQQTYPNGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKE
VFPILAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKEF
SDKISRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLFEKMVP
VSVQQALAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQSILTK
STSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDSDLRAKFKERWQRTP
SNELYKPLRAEGNNFRAVLDKAVQADGQVKERYQSHRDTIALLCKPEPELNAAIPSANPA
KTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALS
VTELDRIYGGLTTKVQESLKKQEELLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAY
DNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP
SIPTPAYQSSPAAGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPAPVATG
TTAPAPSQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQS
PGQAPYPGPQQPSYPFPQPPQQSYYPQQ
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcatctcggtccagctgaaaaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgaatggcggggaggagcaggcccagtactgc
cgcgcggcggaggagctcagcaagctgcgccgcgccgccctcggccgcccgctggacaag
cacgagggcgcgctcgagacgctgctgagatattatgatcagatatgttccattgaaccc
aaattcccattttctgaaaatcagatctgcttgacatttacctggaaggatgcttttgat
aaaggttcactttttggaggatctgtaaaattggctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagatcgcagcagaacagaacctg
gataatgatgaaggattgaaaatcgctgctaagcattaccagtttgctagtggtgccttt
ttacatattaaagagacagttttatctgccttaaatcgagagcctactgtggacatatct
ccggatactgttgggaccctcagtctcattatgctggcacaggcccaagaagtatttttt
ttaaaagccacaagagataaaatgaaagatgccatcatagctaaattggctaatcaggct
gcagattattttggtgatgcttttaaacagtgtcaatacaaagatactctccccaaggag
gtgttccccatcttggctgcaaagcactgtatcatgcaggccaatgctgagtaccaccag
tctatcctggcaaaacagcagaagaaatttggagaagagattgcaaggttacagcatgca
gcagaattgattaaaacagtggcatctcgctatgatgaatatgtcaatgtgaaggaattt
tctgacaaaatcagtcgtgcccttactgcagcaaagaaagacaatgacttcatttatcat
gatcgagttccagaccttaaagatctagaccctattggcaaagccacacttgtgaaatct
accccagtcaatgtaccaatcagccagaaattcactgatctgtttgagaagatggttcct
gtgtcagtgcagcaggctttggctgcctataatcagaggaaagctgatttagttaacaga
tcaattgctcaaatgagagaagccaccactttggcaaatggggtgttagcttcccttaat
cttccagcagcaattgaagatgtatctggagacaccgtacctcagtctatattgactaag
tccacatctgtgattgaacagggaggtatccagactgttgaccagttgatcaaagagcta
cctgaactactgcaaagaaatagagaaatcctggatgagtctttaagattgttggatgaa
gaagaagcaactgacagtgatttaagagcaaaattcaaggaacgctggcaaaggacacca
tccaatgaactctataagcctttacgagcagagggaaacaatttcagagcagttttggat
aaggctgtgcaagcagatggacaagtgaaagaacggtatcagtctcaccgtgacaccatt
gcacttctctgtaagccagaacctgagctgaatgcagccatcccttccgctaacccagca
aagaccatgcagggcagcgaggttgtaaatgtcttaaaatccttattgacaaatcttgat
gaagtaaagaaggaaagagaggggttggagaatgacctgaaatctgtgaattttgacatg
acaagcaaatttttgactgctctggctcaagacggtgtgataaatgaagaagctctttct
gttactgaactggatcgaatctatggaggtcttacgactaaagtccaagaatctctaaag
aaacaggaagaacttcttaaaaatattcaggtctcacaccaggaattttcgaaaatgaag
caatctaacaatgaagctaacttaagagaagaagttttgaagaatttagctactgcgtat
gacaactttgttgaacttgtagctaacttgaaggagggcacgaagttttacaatgaactg
actgagatcctggttaggttccagaacaaatgcagtgatatagtgtttgcacggaagaca
gaaagagatgaactcttaaaggatttgcaacaaagcattgccagagaacctagtgctcct
tcaattcctacccctgcatatcagtcctctccagcagcggggcatgcgccaactcctcca
actccagcgccgagaaccatgccgcctactaagccccagcccccagcccggcctccacct
cctgtgcttccagcaaatcgagctccttctgctactgctccagctccagtggcgactggg
accacggcaccagctccatcacaaactcctggttcagctcctcctccacaggcccaggga
cccccatatcctacctatccaggatatcccgggtattgccaaatgcccatgcccatgggc
tataatccttatgcatacggccagtataatatgccatatccgccagtgtatcaccagagc
cctggacaggctccatacccgggaccccagcagccttcataccccttccctcagccccca
cagcagtcttactatccacagcagtaa
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