Equus caballus (horse): 100050817
Help
Entry
100050817 CDS
T01058
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X3
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100050817 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100050817 (CNOT10)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100050817 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_12
TPR_8
TPR_MalT
TPR_7
TPR_17
DUF6058
Motif
Other DBs
NCBI-GeneID:
100050817
NCBI-ProteinID:
XP_001491273
Ensembl:
ENSECAG00000021306
VGNC:
16674
LinkDB
All DBs
Position
16:complement(53060179..53137842)
Genome browser
AA seq
743 aa
AA seq
DB search
MAADKPADQGAEKHEGTGQSSGITDQEKELSANAFQAFTAGNYDACLQHLASLQDINKDD
YKIILNTAVAEFFKSNQTTTDSLRQTLTQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGNTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSNQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLKKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRK
KPVFQPVHPIQPIQMPPFTVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagagaaacatgaggggacaggtcagtcc
tctgggatcactgatcaagagaaggagttgtccgcaaatgctttccaagcgttcacggct
ggaaattacgatgcttgtctgcaacaccttgcctccctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtggctgagttttttaaaagtaaccaaacaacaaca
gatagtttgagacaaacacttacccagctgaagaatcaggtccactcagctgttgaagaa
atggacggattagatgatgttgaaaacagcatgttgtattacaatcaagcggtcattctt
tatcatctgcggcagtatacagaagcgatatcagttggtgaaaaactttatcagttcata
gaaccttttgaagaaaaatttgcccaagcagtgtgttttttgcttgtagacctgtatata
ttaacctaccaagctgagaaagctttgcatctccttgctgtcctagaaaaaatgatttca
cagggtaacaataacaaaaatggaaagaatgagactggtaataacaccaacaaagacgga
tctaatcataaagctgaaagtggagctctaatagaagctgcaaaatcaaagatacatcag
tataaagtaagagcttatatccaaatgaagtccctgaaagcatgcaaaagggaaatcaag
tcagtcatgaacacagctggaaattctgcaccgtctctgtttcttaaaagcaattttgag
tacttaaggggcaattatcgaaaagctgtgaagctactaaatagttccaacattgctgag
catccaggattcatgaaaacaggtgaatgcttacgatgcatgttctggaataatcttggt
tgcatccattttgccatgagcaagcacaatttgggaattttctactttaaaaaggctcta
caggagaatgacaatgtctgtgcacagctcagtgcaggcaacactgatccaggcaaaaaa
ttttcaggaagacccatgtgtacattactaaccaacaagaggtatgagttgctgtataac
tgtggaattcagcttcttcacattggacggcctcttgctgcctttgagtgtctgattgaa
gctgttcaggtttatcatgcaaatccccgcctctggctacggctggctgaatgctgcatt
gctgccaataaggggacttctgaacaagaaaccaaaggtcttccaagtaaaaaaggaatt
gtacagtctattgttggtcaaggctatcatcgtaaaatagtcctggcatcacagtccatc
cagaatactgtgtataatgacgggcagtcctcagccattcctgttgccagtatggagttt
gcagccatttgtctcagaaatgccttgttgctgttacctgaagaacagcaagatccaaag
caggaaaatggatctaaaaatagtaatcaattaggtgggaacacggagagcagtgaaagc
agtgaaacttgcagcagtaaaagccatgatggagataaattcattccagctccaccttct
tctccattgaaaaaacaggaattagaaaacttaaaatgctccatacttgcctgtagtgct
tacgtggctctggctttgggtgataaccttatggctttgaatcatgcagataaacttctt
cagcagcccaagctgtcaggatctcttaagtttttgggccatttatatgctgcagaagcc
ctcatctctctggacagaatatctgatgccattactcacttgaacccagagaatgtcact
gatgtctccttagggatctcttcaaatgagcaggaccaaggatcagacaaaggagaaaat
gaagcaatggaatcctctgggaagcgagcccctcagtgctaccccagttccgtcaactct
gccaggaccgtgatgctgttcaaccttggcagcgcctactgcctgcggagtgaatatgac
aaagcccgaaagtgtctccaccaggcggcttcaatgatccatcctaaagaagtgccccca
gaagccatcttactggcagtctaccttgaactgcaaaatggtaatacccagctggcctta
cagatcatcaaaaggaatcagctgctccctgcagtgaaaacactctctgaaatgagaaag
aagccagtgtttcagcctgtccacccgatccagcccatccaaatgccacctttcactgta
cagagaaagtga
DBGET
integrated database retrieval system
