Equus caballus (horse): 100050870
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Entry
100050870 CDS
T01058
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100050870 (RAI1)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100050870 (RAI1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
100050870
NCBI-ProteinID:
XP_023509432
VGNC:
22156
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All DBs
Position
11:complement(60437747..60556231)
Genome browser
AA seq
1892 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETPRLENYRQPGQAGLSCDRQRLLAKDYYSPQPYPAYE
GGAAPTGPARGSKGLPSQQALQGRPAFSGYGVQDSSPYPGRYSGEESLQAWGPPQPPPPQ
PQPLPGGVGKYDENLMKKTGVPPGRQYPEQGAQLPFRTHPLHVQQQLPQPQQPLVYPKLQ
RQKLQNDITSPLPFPQGGHFPQHSQSFPTSSTYSATGQGGGQGAHSYKSCTAPSAQPHDR
PLTANASLAPGQRVQNLHAYQSGRLSYDPQKQQQQQALQSRHHAQETLHYQNLAKYQHYG
QQGPGYCQPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQ
PLSTGAFPAGITDHSHFMPLLNPSPTDAAGSMDTQAGNCKTLQKDKLPESLLSDLSLQSL
TALTSQVENISSTVQQLLLSKAAAPQRKAAKNPVPRTPEQHKSQHCSPESSGYSAEPAGT
PLSEPLSSTPQSSHAEPPEADYLSGSEDPLERSFLYCNQARGSPARVNSNSKAKPESVST
CSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQ
EAIGEKADKAWVEAPGLAKDASKPPFSLENHSACLDAMAKNAWPRPGEPEALPESLQLDK
SGNTKDFSPGLFEDPSVGFATPDPKKTTGSLSFVTKPTLGVATSDPATAAFDCFPDTTTT
SSADSANPFAWPEENLGDACPRWGLHPGELTKGLEPDGKASESIGKENAHEASACLGFQE
EEPSREEATVPRDSKQEVACGVQAAAGGALRCPEAGKAEQWLEDGQHCCSAADFVDLPLL
PPTGRKEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKAPLMCTKEEVEEVLDPKAGWGS
PCHLSGESVILLGPTVGAESKVQSWFESSLSHMKPGEEGPEGALAPGDSTTLAPDASLAQ
KPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPP
QGQMEGAGAPGRGASDGLPRMCTRSFTALSEPRTPGPPGLTTTPAPPDKLGGKQRAAFKS
GKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTPGKDQRSMILRSRTKTQE
VFHSKRRRPSESRLPNCRASKKLLANSHLPTTFKASSSPQKEGRASQRARVPKPGAGSKL
SDRPLPALKRKSAFMAPVPTKKRSLALRSGSGSACGLEVGAKEEGSEGSPPVFKRMSSPK
KAKPTKGGGEPPLKPLPPEAPDGCLKLPSRPAFQGALKTKVLPPRKGRGLKLEAIVQKIT
SPGLKKFTCKVPGAPPGTTLGPALPEKDRGLKSAGGSLLGAEEGLLNVGVGQKLPGAPGA
EPLCRNPTNRPFKGKLPNSKKLSSADCLKTEAFTSPEALLSRGAALAPKKRSRKGRAGAL
GLPKGPLEKRPHLGLAPLLTPRDRANGTQGGGEDSSGGGGKKPKMEELGLASQPPEGRPC
QPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVLPLDPAEPEIR
LKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTVCTVVNSPGEEPKPHRKPSSSASSSSS
SCSFSLDTTGAPLATLPGGSVLQPRHPLPLSSTMRLGPVVSKALSTSCLVCCLCQNPANF
KDLGDLCGPYYPEHCLPKKKPKFKEKVRPEGICEEASLPLERTLKGLECAAAATATGKPP
RPDGPADPAKQGSVRTSARGLSRRLQSCYCCDGRGDSGEEVAPADKSRKHECSKEPPAEP
GGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAGATIGCCQKGCI
HTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcagaactaccagcagacc
tcgcaggagacacctcgcctggagaattacaggcagccgggccaggccgggctgagctgc
gaccggcagcggctgctggccaaggactattacagcccacagccgtacccggcctacgag
ggcggcgcggcgcccaccggcccagcccgtggcagcaagggcctgccctcccagcaggcc
ctgcaggggaggccggccttctcgggctacggcgtccaggacagtagcccttacccgggc
cgctactcaggcgaggagagcctgcaggcctggggccccccccagccgccacccccccag
ccgcagcccctgccagggggggtgggcaaatatgatgagaacttgatgaaaaagacagga
gtgccccctggtaggcagtacccggagcagggcgcccagctgcccttccggactcacccc
ctgcacgtccagcagcagctgccacagccccagcagcccctggtgtaccccaagctccaa
agacagaaactgcagaatgacatcacctcgcctctgccctttccccagggcggtcacttt
ccccagcattcgcagtccttccccacctcctccacctactctgccaccggccagggcggg
gggcagggggcccattcctacaagagttgcacggccccgtctgcccagccccatgacagg
ccgctgactgccaatgccagcctggccccggggcagcgggtccagaaccttcatgcctat
cagtcgggccgcctcagctatgacccgcagaaacagcagcagcagcaagcccttcagagc
cggcaccatgcccaggaaaccctccattaccaaaaccttgccaagtaccaacactacggg
cagcaaggcccaggctactgccagccagacacggccgtcaggactccggaacagtactac
cagaccttcagccccagctccagccactcgcccgcgcgctctgtgggccgctccccttcc
tacagctccactccatcgccactgatgccgaacctggagaacttcccctacagccagcag
ccgctcagcaccggggccttccccgccggcatcaccgaccacagccacttcatgcccctg
ctcaacccctccccgacagacgctgccggctccatggacacccaggccggcaactgcaag
acgctgcagaaggacaagctcccggagagcctgctgtcagacctcagcctgcagagcctc
acggccctgacctcgcaagtggagaacatctccagcaccgtgcagcagctgctgctctcc
aaggccgccgcgcctcagaggaaggctgccaagaacccggtgcccaggacaccggagcag
cacaaaagccagcactgtagccctgagagcagtggctactcagctgagccagcaggcacg
ccgctgtcagagccgctgagcagcacgccgcaatccagccacgccgagcctccggaggct
gactacctgagcggctccgaggacccgctggagcgcagctttctctactgcaaccaggcc
cgcggcagccctgccagggtcaacagcaactcaaaggccaagcctgagtccgtgtccacc
tgttccgtgacgtcgcccgacgacatgtccaccaagtctgatgactccttccagagcctg
cacagcagcctgccgctcgacagcttctccaaatttgtggcaggggagcgggactgcccg
cggctgctgctcagtgccctggcgcaggaggacctggcctctgagatcctggggctgcag
gaggccattggcgagaaggccgacaaggcctgggtcgaggcacccggcctggccaaggac
gccagcaagccgcccttctcgctggagaaccacagcgcttgcctggacgccatggccaag
aacgcatggcctcggccaggggagccagaggccctgcccgagtccctgcagctggacaag
agtggcaacaccaaggacttcagcccggggctgtttgaagacccttccgtgggcttcgcc
acccccgaccccaagaagacgactggttccctctcttttgtcaccaagcccacccttggg
gttgccacctcggaccctgccacggcagcttttgactgcttcccggacacaaccaccacc
agctcagcggacagtgccaacccctttgcctggccggaggaaaacttgggggatgcgtgt
ccccggtgggggctgcaccccggggagctcacgaagggcctggagccggatgggaaggcc
tcggaaagcatcggcaaggagaatgcccacgaggcttcggcttgcctgggcttccaggag
gaggagccctccagggaggaggccaccgtgccccgggactccaagcaggaagtggcgtgt
ggggtgcaggcggcggcgggtggggcgctgcggtgcccagaggcgggcaaggccgagcag
tggctggaggacggccagcactgctgctccgccgcagacttcgtggacctcccgctgctg
ccgcccacgggcaggaaggaggacctggaggcggaggaggagtactcctccctgtgtgag
ctcctgggcagccccgagcagaggcctggcatgcaggacccgctgtcgccaaaggccccc
ctcatgtgcaccaaggaggaggtggaggaggtgctggaccccaaggcaggctggggctcc
ccatgccacctctccggggagtctgtcatcttgctgggcccaaccgtgggtgccgagtcg
aaggtccagagctggtttgagtcctccctgtcacatatgaagccaggtgaagaagggccc
gagggggcgctggctccgggggactccaccaccctcgccccagatgcctctctggcccag
aagcccaacaagcctgctgtgcccgaggctcccattgctaagaaagagcccgtgcctcgc
ggcaagagtttacggagccggcgagtgcaccgggggctgcccgaggccgaggactccccg
tgcagggcgcctgcactgcccaaagacctcctgctccccgagtcgtgcacagggcccccc
cagggacagatggaaggggcgggggccccaggccggggggcctcagacgggctccccagg
atgtgcacccgctccttcacggccctgagcgagcctcgcacacctggacccccaggcctg
accaccacccctgctcccccagacaaactaggcggcaagcagcgagccgccttcaagtca
ggcaagcgggtagggaagccttcacccaaggccgcctccagccccagcaacccggccgcc
ctgcctgtggcctctgacagcagccccatgggctccaaaaccaaggagacggactcacct
ggcactccaggcaaggaccagcgctccatgatccttcggtcccgcaccaaaacccaggag
gtcttccactccaagcggcggcggccctcagagagccggctccccaactgccgtgccagc
aagaagctccttgccaacagccacctacccactacgttcaaggcctccagcagcccccag
aaggagggcagggccagccagcgggcacgggtccccaagcccggtgcaggcagcaagctc
tctgaccggcccctcccggcgctcaaaaggaagtcggccttcatggcgcccgtccccacc
aagaagcggagcctggccttacggagtggcagcggcagcgcctgcggccttgaggtgggc
gcgaaggaggaggggtccgagggctcccccccagtcttcaagaggatgtcttctcccaag
aaggccaagcccaccaagggcggtggggagccccccttgaagcccctgcccccagaggcc
cccgatggctgcctgaagctcccctcgcggccagccttccagggggccctgaagaccaag
gtgctgccaccgcggaagggccgaggcttgaagctggaggccatcgtgcagaagatcacc
tcgcccggcctcaagaagttcacctgcaaggtgccgggggccccgcctgggaccaccctg
ggcccggccctcccggagaaggaccgtgggctcaagagtgccgggggcagcctgctggga
gcggaggaaggtctgttaaacgtgggtgtggggcagaaactcccaggagctccaggggcc
gagccattgtgcagaaaccccaccaatagacccttcaaaggcaaactcccaaacagcaag
aaactgtcctcggccgactgtctcaaaaccgaggccttcacgtccccagaggccctgctg
tcacggggagctgccctggcacctaagaagaggagccggaaaggcagggctggagccctc
ggactccccaaaggccccctggagaagcggccccacctaggcctggctccgctcctgact
ccccgagacagggccaacggcacgcagggcggcggggaggacagctctggtggaggaggc
aagaagccaaagatggaggagttgggtctggcttcccagccccctgagggccggccctgc
cagccccagacgagggcacagaagcagccgggccatgccaactacagcagctattcgaag
cggaagcgcctcactcggggccgggccaagaacaccacctcctcaccctgtaaggggcgt
gccaagaggcggcggcagcagcaggtgctgcccctggaccctgcagagcctgaaatccgc
ctcaagtacatttcctcatgcaagcggctgcgggcagacagccgcaccccggccttctcg
ccctttgtgcgggtggagaagcgagacgcattcaccaccgtgtgcactgttgtcaactcc
cctggggaggagcccaagccccacaggaagccgtcctcctctgcctcttcttcctcatcc
tcatgctcattctctttggacacgacgggggcccccctggctacactccccggaggctcc
gtgctgcagccgcggcaccccctgcccctctcctccaccatgcgtctggggcctgtggtc
tccaaggccctgagtacctcttgccttgtttgctgcctctgccaaaacccggccaacttc
aaggacctcggggacctctgtgggccctactatcctgaacactgcctccccaaaaagaag
ccaaaattcaaggagaaggtgcgaccagagggcatctgtgaggaggcctcgctgcccctc
gagagaacactcaaaggcctcgagtgtgcagctgccgccactgccaccgggaagcccccc
aggcctgacggcccggccgaccccgccaagcagggctcagtgcgcaccagtgcccggggc
ctgtcccggcggctgcagagttgctactgctgtgacggtcggggggacagtggcgaggag
gtggccccagccgacaagagccgcaagcatgaatgcagcaaggagccgccggcagagcct
ggcggggacacccaggagcactgggtgcacgaggcctgcgccgtgtggacgggcggggtc
tacctggtggccgggaagctctttgggctgcaagaggccatgaaggtggccgtggacatg
acttgttccagctgccaagaagccggggccaccattgggtgctgccaaaaaggatgcatc
cacacctaccattacccgtgcgccagtgatgcaggttgcatattcatcgaagagaacttt
tctttgaaatgtcccaaacataagaggctgccgttgtaa
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