Equus caballus (horse): 100050907
Help
Entry
100050907 CDS
T01058
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
ecb
Equus caballus (horse)
Pathway
ecb05017
Spinocerebellar ataxia
ecb05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100050907 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100050907 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100050907 (VLDLR)
Membrane trafficking [BR:
ecb04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100050907 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
100050907
NCBI-ProteinID:
XP_023483037
Ensembl:
ENSECAG00000021859
VGNC:
24911
LinkDB
All DBs
Position
23:23784675..23814624
Genome browser
AA seq
1138 aa
AA seq
DB search
MTVGSAQLLRRQVPWIRKLGQTPGIGGEGGARANQRPPRAPVSLGRTRGAAGPQEQSGWQ
QRPRPRPLTHARSHSHTHSHTPGADTWQPRAYKRSVRRERRAEAAAPPSPLTTPPPAPSS
LLTPRSSSRQCGCSAAGSSLCLLLCSRLPTPSPSPPLLFPPLPSSPLQRLHYFLPAGSAC
TAAAARGGGWVGGLAGGEEIVQVVGEGGPSSSPLPFPPSNSFPSSFPSPLLPPCPHLLPP
FRRAGNLLCGASGGGGGGGTIQAGTMGTSARWALWLLLALCWAPREIGATGAGRKAKCEP
SQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDP
DCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCS
PDEFTCSSGRCISRNFVCNGQDDCNDGSDELDCAPPTCGAHEFQCSTSSCIPNSWVCDDD
ADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPS
RTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIS
KVCNQEQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCG
DIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIG
LERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNP
AAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDW
GEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRR
IVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYH
ELVQPAGKNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYKLEENGQQCQRTATT
VTYSETKDTNTTEISPTSGLVPGGINVTTAVSEVSVPPKGTSAAWAILPLLLLAMAAVGG
YLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagggagcgcacagctgctgcggcggcaggttccctggatcaggaaattaggg
caaacaccggggattggaggcgagggcggcgcgcgagccaaccagcggccgccccgggcc
cccgtgagcctcgggcggacgcgcggagcagcggggccccaggagcagtccgggtggcag
cagcggccacggccacggccactcacacacgcacgctcacactcgcacacacactcacac
acccccggcgcagacacctggcagccccgagcttataagaggagcgtgcggagggaaagg
agggctgaagccgccgctcccccctccccgctgaccactccccctcctgccccctcctcg
ctccttaccccgcgctccagcagccgccagtgtgggtgctccgcggccggctcctctctc
tgtcttctcctctgctctcggctccccaccccctctccctcccctcccctcctcttccct
cctcttccctcctctcctctgcagcgcctgcattattttctgcccgcaggctcggcttgc
actgctgctgcagcccggggaggtgggtgggtgggtgggttggctggtggggaggagatt
gtgcaagttgtaggggagggggggccctcttcttccccgctccctttccccccttctaac
tccttcccctcctccttcccctcccccctcctccctccctgcccccacctccttcctcct
ttccgaagggctggtaacttgttgtgcggagcgagcggcggcggcggcggcggcggcacc
atccaggcgggcaccatgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctg
tgctgggcgccccgggaaatcggcgccaccggagcaggaagaaaagccaaatgtgaaccc
tcccaattccagtgcacaaacggccgttgtattacactcttgtggaaatgtgatggggac
gaagactgtgctgacggcagtgacgaaaagaactgtgtgaagaagacgtgtgctgagtct
gacttcgtgtgcaacaatggccagtgtgtgcccaaccgatggcagtgtgatggggatcct
gactgtgaggatggttctgatgaaagcccagaacagtgccatatgagaacatgccgcata
aatgaaatcagctgtggcgcccgttctactcagtgtatcccagtgtcctggagatgtgat
ggtgaaaatgattgtgacagtggagaagatgaagaaaactgtggtaacataacgtgtagc
cctgatgagttcacttgctccagtggccgctgcatctccaggaattttgtatgcaatggt
caggatgactgtaacgacggcagcgatgagctggactgtgctccgcccacctgcggcgcc
cacgagttccagtgcagcacctcctcctgcatccccaacagctgggtatgcgacgatgat
gcagactgctcggaccaatcagatgagtccctagagcagtgtggccgccagccagtgata
cacaccaagtgcccggccagcgagatccagtgtggctccggcgagtgcatccacaagaag
tggcgatgtgatggggatcctgactgcaaagatggcagcgatgaagtcaactgtccttct
cgaacctgcagacctgaccaatttgagtgtgaggatggtagctgcatccatggcagcagg
cagtgtaacgggatccgagactgtgtcgacggctctgatgaagtcaactgcaaaaacgtc
aatcagtgcctgggccctggaaaattcaagtgcagaagcggggagtgcatagacatcagt
aaagtatgtaaccaggagcaggactgcagggactggagtgatgagcccctgaaagaatgc
aatgtgaatgaatgcttggttaataatggtggatgttcccatatctgcaaagacctagtg
ataggctacgaatgtgactgtgcagctgggtttgaactgatagataggaaaacctgtgga
gatattgacgaatgccaaaatccgggaatctgcagtcaaatttgtatcaacttaaaaggc
ggttacaagtgtgaatgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaag
gcagtaggcaaagagccaagtctgatcttcacgaatcgaagagatatcaggaagattggc
ttagagaggaaagaatatatccaactagttgaacagctaagaaacaccgtggctctcgat
gctgacattgctgctcagaaacttttctgggctgatctaagccaaaaggccatcttcagt
gcctcaattgatgacaaggttggtagacatgttaaaatgatcgacaatgtctataatcct
gcagccattgctgttgattgggtgtacaagaccatctactggactgatgcggcttctaag
actatttcagtagctaccctagacggaaccaagaggaagttcctgtttaactcggacttg
cgagagcccgcctccatagctgtggacccgttatctggctttgtttactggtcagactgg
ggtgaaccagctaaaatagaaaaagcgggaatgaatggatttgatagacggccgctggtg
acagcggacatccaatggcctaacgggattacacttgaccttataaagagccgcctctat
tggcttgactctaagttgcatatgttatccagtgtggacttgaatggccaagatcgtcgg
atagtgctgaagtctctggagttcctagctcatcctctcgcactaacaatatttgaggat
cgtgtctattggatagacggggaaaatgaagccgtctatggtgccaataagttcactgga
tcggagctggccactctagttaacaaccttaacgatgcccaagacatcattgtgtaccat
gaacttgtacagccagcaggtaaaaattggtgtgaagaagacatggagaatggaggatgt
gaatacctatgcctgccagcaccacagattaatgatcactctccaaaatatacctgttcc
tgtcccaatgggtacaagctggaagaaaatggccagcagtgccaacgtactgcaactact
gtgacttacagtgagacaaaagataccaacacaacagaaatttcaccaactagtggacta
gttcctggagggatcaacgtgaccacagcagtgtcggaggtcagcgttcccccaaaaggg
acttctgctgcctgggccatccttcccctcttgctcttagcaatggcagcagtaggcggc
tacttgatgtggcggaattggcaacacaagaacatgaaaagcatgaacttcgacaatcct
gtgtacttgaagaccactgaagaggacctgtcaatagacattggtagacacagtgcttct
gtgggacacacgtacccagcaatatcagttgtaagcacagacgatgatctagcttga
DBGET
integrated database retrieval system
