KEGG   Equus caballus (horse): 100051138
Entry
100051138         CDS       T01058                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
  KO
K14308  nuclear pore complex protein Nup54
Organism
ecb  Equus caballus (horse)
Pathway
ecb03013  Nucleocytoplasmic transport
ecb05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100051138 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100051138 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100051138 (NUP54)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100051138 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 100051138
NCBI-ProteinID: XP_014594170
Ensembl: ENSECAG00000025004
VGNC: 20972
LinkDB
Position
3:61757359..61792138
AA seq 507 aa
MAFNFGAPSGTSGTAGATAAPAGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFSTQQQQQTTLGGLFSQPTQAPTQSNQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSC
MPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEV
VIYVIERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNP
PAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISE
LQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCE
LNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggccttcaactttggggctccgtcgggcacctcgggcaccgctggagccaccgcggcc
cccgcgggcgggtttggaggctttgggacaaccagcaccacagcaggttctgcgttcagc
ttttctgccccagcgaacacaggcactactggactctttggtggcactcagaacaaaggt
tttggatttggtactggttttggcacaacaactggaactagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttagcacacagcagcagcagcaaactacatta
ggtggtctcttcagtcagcctacacaagctcctacccagtccaaccaactgataaatact
gcaagtgctctttctgctccaacgctgttgggagatgagagagatgctattttggcaaaa
tggaatcaactgcaggccttttggggaacaggaaaaggatatttcaacaataacattcca
ccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttatagttgt
atgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaagaaaca
gatattcgaagccagcaacagcaattggtagaatcattgcataaagttttgggaggaaac
cagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaagtt
gtcatttatgttattgagcgttctccaaatggtacttcaagaagagttccagctacaaca
ctatatgcccattttgaacaaactaatataaaaacgcagttacagcaacttggtgtaacc
ctttctatgactagaacagaactttctcctgcacaaatcaaacagctcttacagaatcct
cctgccggtgttgatcctattatttgggaacaagccaaggtggataaccctgattctgaa
aagttaattcctgtaccaatggttggtttcaaagaacttcttcgaagactgaaggttcaa
gatcagatgactaagcaacatcagaccagattagatataatatctgaagatattagtgaa
ttacagaagaatcaaaccacaactatggccaaaattgcacaatacaagaggaaactcatg
gacctttcccatagaaccttacaggtcctaatcaaacaggaaattcagaggaagagtggg
tatgccatccaagctgatgaagaacagttgcgagttcagctagacacaattcagtgtgaa
ctaaatgcacctactcagtttaagggccgactaaatgaactgatgtcccaaatcaggatg
cagaatcattttggagcagtcagatctgaagaaagatattacatagatgcagatctgtta
cgagaaatcaaacagcacttgaaacaacaacaggaaggcctcagccacttgattagcatc
ataaaagatgatctagaagacataaaattggtagaacatggattgaatgaaactatccac
atcagaggtggtgtctttagttga

DBGET integrated database retrieval system