Equus caballus (horse): 100051138
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Entry
100051138 CDS
T01058
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100051138 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100051138 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100051138 (NUP54)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100051138 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
100051138
NCBI-ProteinID:
XP_014594170
Ensembl:
ENSECAG00000025004
VGNC:
20972
LinkDB
All DBs
Position
3:61757359..61792138
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AA seq
507 aa
AA seq
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MAFNFGAPSGTSGTAGATAAPAGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFSTQQQQQTTLGGLFSQPTQAPTQSNQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSC
MPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEV
VIYVIERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNP
PAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISE
LQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCE
LNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccgtcgggcacctcgggcaccgctggagccaccgcggcc
cccgcgggcgggtttggaggctttgggacaaccagcaccacagcaggttctgcgttcagc
ttttctgccccagcgaacacaggcactactggactctttggtggcactcagaacaaaggt
tttggatttggtactggttttggcacaacaactggaactagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttagcacacagcagcagcagcaaactacatta
ggtggtctcttcagtcagcctacacaagctcctacccagtccaaccaactgataaatact
gcaagtgctctttctgctccaacgctgttgggagatgagagagatgctattttggcaaaa
tggaatcaactgcaggccttttggggaacaggaaaaggatatttcaacaataacattcca
ccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttatagttgt
atgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaagaaaca
gatattcgaagccagcaacagcaattggtagaatcattgcataaagttttgggaggaaac
cagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaagtt
gtcatttatgttattgagcgttctccaaatggtacttcaagaagagttccagctacaaca
ctatatgcccattttgaacaaactaatataaaaacgcagttacagcaacttggtgtaacc
ctttctatgactagaacagaactttctcctgcacaaatcaaacagctcttacagaatcct
cctgccggtgttgatcctattatttgggaacaagccaaggtggataaccctgattctgaa
aagttaattcctgtaccaatggttggtttcaaagaacttcttcgaagactgaaggttcaa
gatcagatgactaagcaacatcagaccagattagatataatatctgaagatattagtgaa
ttacagaagaatcaaaccacaactatggccaaaattgcacaatacaagaggaaactcatg
gacctttcccatagaaccttacaggtcctaatcaaacaggaaattcagaggaagagtggg
tatgccatccaagctgatgaagaacagttgcgagttcagctagacacaattcagtgtgaa
ctaaatgcacctactcagtttaagggccgactaaatgaactgatgtcccaaatcaggatg
cagaatcattttggagcagtcagatctgaagaaagatattacatagatgcagatctgtta
cgagaaatcaaacagcacttgaaacaacaacaggaaggcctcagccacttgattagcatc
ataaaagatgatctagaagacataaaattggtagaacatggattgaatgaaactatccac
atcagaggtggtgtctttagttga
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