Equus caballus (horse): 100051158
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Entry
100051158 CDS
T01058
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100051158 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100051158 (DHX16)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100051158 (DHX16)
Spliceosome [BR:
ecb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100051158 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100051158
NCBI-ProteinID:
XP_001491503
Ensembl:
ENSECAG00000008537
VGNC:
49406
LinkDB
All DBs
Position
20:complement(30605764..30620902)
Genome browser
AA seq
1045 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYKLLEDSEESSEETVGRAGSSLQK
KRKKRKHLRKKRQEEEEEEEEEEVPEKGKRKTEGSKQQTEKPESEDEWERTERERLQDLE
ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA
KREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATN
RYHMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLV
LEEEETIEFVRATQLQGDEEPSAPPPPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ
VLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
KDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACV
VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
WCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTR
SGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY
KAKELEDPHAKKMPKKIGKTREELG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcggggctggagcgctgggtgcaggacgagctgcactcggtgctgggc
ctgagcgagcggcacgtggcccagttcctcatcggaaccgcgcagcgctgcgcctcggcc
gaggagttcgtgcagcgcctgcgggacactgatacactggacctcagcgggccggcccgg
gacttcgcgctgagactctggaacaaggtccctcggaaggcagtggtggaaaagccagct
cgggccgccgagcgagaggcccgagccctgctggagaagaaccgatcttataagttgctg
gaagacagtgaggagagcagtgaggagaccgtgggcagggctgggagcagtctccagaag
aagcgtaaaaaacggaaacacctcaggaagaaacgtcaggaggaggaggaggaggaagaa
gaagaagaagttcctgagaaagggaagagaaagacagaggggagtaaacagcagacagag
aagccagagtctgaggatgagtgggagcggacagagcgagagcgccttcaggacctggag
gagcgggatgccttcgcggagcgggttcggcagcgggacaaggatcggactcgtaatgtc
ctggaacggtcagacaagaaggcttatgaagaagctcagaagcgcctcaagatggctgag
gaagaccggaaagccatggtccctgagctgcggaagaaatcgcgccgagaatacctggct
aagagggagcgggagaagctggaggacctggaggccgagctggctgatgaggagttcctt
tttggcgacgtggagctgagtcgacatgagcggcgggaactcaaatacaaacggcgagtg
cgggatctggcccgagagtaccgggcagccggggagcaggagaagctggaggccaccaat
cgctaccacatgcccgaggagacccgaggacagccagcacgagctgtggatctagtggag
gaggaatcgggcgcccctggggaggagcagcggcgctgggaggaggcccggcttggggca
gcgtccctgaagtttggggcccgagatgctgcctctcaggagcccaagtatcagctggtg
ttggaggaagaggagaccatcgagtttgtccgggccactcagctccagggtgacgaggag
ccgtcagctccaccccctccaacccaggcccagcagaaggagtccatccaggccgtccgc
cgcagcctccccgtgttcccattccgagaggagctcctggctgctattgctaatcatcag
gtcctcatcattgaaggcgagacaggctccgggaagaccacccaaatcccgcagtatcta
tttgaggagggttacacaaagaagggtatgaagattgcctgcacccagccccggagagtg
gcagccatgagcgtggccgcccgagtggcacgggagatgggtgtgaagcttggcaatgag
gttggctacagcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatg
acagacgggatgcttctccgagagttcctgtctgagcctgaccttgcgagttacagcgtg
gtgatggtggatgaggctcatgaacggaccctacacacagacattctctttgggttgatc
aaggatgttgctcgcttccgacctgagctcaaggtcctggtggcttcagccacactggac
actgcccgtttttccaccttctttgatgatgcccctgtcttccgaatccctggacgcagg
tttccagttgacatcttctataccaaggctccagaggctgactacctggaagcctgtgta
gtgtcggtgctgcagatccatgtgacccagccccctggggatatcctggtgttcctgaca
ggacaggaggagatcgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggc
tccaaaatccgggagctcctggttctgcccatctatgccaacctgccttctgacatgcaa
gctcgtatcttccagcccacgccccctggggcacggaaggtggttgtggcaacaaacatc
gccgagacatcgctcaccattgagggcatcatttacgtgctggatccagggttctgtaag
cagaagagctacaacccccgcacaggcatggaatcgctcactgtcacaccctgcagcaag
gcctcagccaatcagcgagctggtcgggcaggtcgggtggctgctgggaagtgcttccgc
ctgtataccgcctgggcctatcagcacgagctggaggaaaccacagtgcccgagatccag
aggaccagcctgggcaatgtcgtgttgctgctcaagagcttggggatccatgacctaatg
cactttgatttcctggacccgccgccatatgagaccctgctgctggctttggagcagctg
tacgctctgggagctctcaaccacttgggggagctcaccacgtctggtcgaaagatggca
gagctgccagtggaccccatgctgtctaaaatgatcttggcctctgagaaatacagctgt
tcagaggagatcctgacggtggctgccatgctctctgtcaacaattccatcttctaccga
cccaaggacaaggtcgtccatgctgataatgcgcgtgtcaacttcttcctccctggtggg
gaccatctggttctgctaaacgtttatacacagtgggctgagagtggttactcttcccag
tggtgctatgagaattttgtacagttcagatcaatgcgccgagcccgggatgtacgggaa
cagctggaggggctcttggaacgcgtggaagttggtctcagttcctgccagggggactat
atccgtgtacgcaaggccatcactgctggttacttttaccacacagcgcggttgactcgc
agcggctatcgcacagtcaaacagcagcagacagtgttcatccatcccaactcctccctc
tttgaggaacagccacgctggctgctctaccatgaacttgtcttgaccaccaaggagttc
atgagacaggtactggagattgagagcagttggcttctggaggtggctccccactactat
aaggccaaggagctagaagatccccatgctaagaaaatgcccaaaaaaataggcaagaca
cgggaagagctagggtaa
DBGET
integrated database retrieval system
