Equus caballus (horse): 100051289
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Entry
100051289 CDS
T01058
Symbol
VPS50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100051289 (VPS50)
Membrane trafficking [BR:
ecb04131
]
Protein recycling
Others
EARP complex
100051289 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
100051289
NCBI-ProteinID:
XP_001492692
Ensembl:
ENSECAG00000022811
VGNC:
24933
LinkDB
All DBs
Position
4:36933352..37065020
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPTDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDTISASEG
SNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTSTLAAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVWIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgactcgacagggtcttaaaagccctccagagagcctc
agtgatctcggtgccatcgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacagcctactgaccctcaagctgaacaagaactaattaatagtattgaacaagta
tatttttctacagactcgtttgatattgttaaatatgagctggagaagctccctccagtt
ctcaatctgcaagaattagaagagtacagagacaaattgaaacaacaacaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagtgacctcattgcagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgcgaaggaaggttttactcaagctagtttaggccttcttgcaaat
cagaggaaacggcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgttggaggaggaagactatcctggagctatt
cagttgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgtataagt
gaattgaattcaaagctgcaagatactttagaacaaattgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattacactaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaatactgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacagtgaggacactatttctgcttctgaaggg
agtaatatgatgggtactgaagaaactaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtctatattcaaatacgacgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagagtct
attagaaagcaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactg
agaatgtttctggagaatgagacctgggaactttgtcctgttaaatcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggagcagtctcgttccccgtcagtttcacctagt
aagcagccagcctcaacttcctccaaaacagtgactttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgac
agcgatgttcctgaggagctgaagcgagactatgtggacgagcagacaggcgacgctcct
gtgaagagcgtttctcgagaaactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataagacttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactaggccttagtagtagtagattaaggacaactctaaacagaatacaa
gaaagccttattgatctggaagtttcagctgatcctacttccacactcgcagcagcagaa
gagagaaaggagaaggttccgagcccacatctcagtcacctggtggttttgacatctggg
gatacattgtatgggttggcagaaagagtggtagccacagaatccttggtattcttggct
gaacagttcgagttccttcagccacatcttgatgctgtgatgcctgcagtcaaaaagccc
ttccttcagcagttttattctcagacagtctcaactgccagtgaactacgcaagccaatt
tactggattgtggctggtaaagccattgattatgaacagatgctgctcctaatggctaac
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcattgtta
aaggaatttgagcagtttaacaggaggttaaatgaggtttccaagagagtttggataccc
ttgcctgtgtctaatatactttgggagcattgtatacgactggctaatagaacgattgtg
gaaggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcagcagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtggaaacctatattaaagcctactacctaacagagaatgacatggagcgctgg
atcaaagagcacagggaatattcaacaaagcagctgaccaatctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctagcagctattgatgatatagac
agacccaaaagataa
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