Equus caballus (horse): 100051494
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Entry
100051494 CDS
T01058
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100051494 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100051494 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100051494 (NUP50)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100051494 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
100051494
NCBI-ProteinID:
NP_001296247
Ensembl:
ENSECAG00000016276
VGNC:
20971
LinkDB
All DBs
Position
28:42297729..42317564
Genome browser
AA seq
469 aa
AA seq
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MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDSGGAFKG
FKGLFVPSGGGGFSGFGSGAGGKPLEGLSNGNSVTGAPPFSSARAAAETKAAFGSIAANG
PTSLVDKKISNPKTNGDSQQPSSSGLTSSAAPVGNAYHKQLAALNCSVRDWIVKHVNTNP
LCDLTPIFKDYEKYLASIEQQHGNSGSSNSESEANKMSVETQSPSLFGSTKLQQESPFLF
HGNKTEDTSAKKLEAVSEKKTDPSLGATSASFNFGKKVDSSILGSLNSGPLTGFSFSSGN
SSLFGKDSTQNKPVPSPFSAKTLESPAEGGSNECKGGDEEENDEPPKVVVTEVKEEDAFY
SKKCKLFYKKDNEFKEKGVGTLHLKPTANQKTQLLVRADTNLGNILLNVLVPPNMPCART
GKNNVLIVCVPNPPVDEKNATIPVTMLIRVKTSEDADELHNILLEKKDV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgccgagaaggaattgacagataggaattgggatcaagaagatgaa
gcagaagaggtgggaacattctcggtcgccagtgaggaagtgttgaagaatagagctata
aagaaagcaaagcgtagaaatgttggatttgaatctgatagtggaggggccttcaaaggt
tttaaaggtttgtttgtaccttctggaggaggcgggttttctggatttggtagtggtgct
ggagggaagcctttggaaggactgtccaatggaaacagcgtaactggtgcccctcccttc
tccagtgcaagggcagcagccgagaccaaggcagcctttggatctattgccgcaaatggc
cctacctccttggttgataaaaagatttcgaatcccaaaactaacggcgacagccagcag
ccttcctcctctggccttacctcgagtgcagcccctgtcgggaatgcctatcacaagcag
ctggctgccttaaactgctctgttcgggattggatagtgaagcacgtgaacacaaacccg
ctctgcgatctgacacccatctttaaagactatgagaaatacttagccagtattgagcag
caacatgggaacagtggcagcagtaattctgaaagtgaagctaacaaaatgtcagttgaa
acacagtctccttccctctttggttcaacaaaattacagcaagagtcaccatttctgttt
catggcaacaaaacagaggatacatctgcaaagaagctggaggctgtgtctgaaaagaaa
acggacccatcactaggagcaacaagtgcctcatttaatttcggcaagaaagttgatagt
tctattttgggctcattaaactctggccccttgactggattttcattttcttctggaaac
tccagtttatttggcaaagatagtacccagaataaaccagttccttcgccattttccgct
aaaacactggagagcccggcagaaggtggtagtaatgaatgcaaaggtggtgatgaagaa
gagaatgatgagccgcccaaagtagtagttactgaagtaaaagaagaagatgctttttac
tccaaaaagtgtaaactattttacaagaaagacaatgaatttaaagagaagggcgtaggt
actctgcatttaaaacctacagcgaatcagaagacacagcttttagtgcgggcagacacc
aatttaggcaacatattgctgaatgttctggtcccacccaatatgccatgtgcccgaaca
gggaaaaacaacgtacttattgtctgtgttccaaatcctcccgtcgatgagaagaacgcc
accatcccagttaccatgttaattcgggtgaaaacgagcgaggatgcagatgagttgcac
aacattttactggagaaaaaggacgtctga
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