KEGG   Equus caballus (horse): 100051844
Entry
100051844         CDS       T01058                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
ecb  Equus caballus (horse)
Pathway
ecb03082  ATP-dependent chromatin remodeling
ecb05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100051844 (SS18)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    100051844 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecb03036]
    100051844 (SS18)
Chromosome and associated proteins [BR:ecb03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    100051844 (SS18)
   GBAF(ncBAF) complex
    100051844 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 100051844
NCBI-ProteinID: XP_023503359
Ensembl: ENSECAG00000007703
VGNC: 23603
UniProt: A0A3Q2H1Q2
LinkDB
Position
8:complement(50675164..50755535)
AA seq 418 aa
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMASDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNITNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtctgtggcgttcgcagcccccaggcagcgaggcaaaggggagatcactcccgccgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tctcacaacatggcttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatataacaaacagttccatgaacatgccttcaagcagccatggatccatg
ggaggttacaaccattccgtgccatcatcacagagcatgccagtacagaatcagatgacg
atgagtcaagggcagccaatgggaaactacggccccagaccaaatatgaatatgcagcca
aaccaaggtccaatgatgcatcagcagcctccttctcaacaatacaatatgccacaggga
ggtgggcagcattaccaaggccaacagccacctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatggggcagagacagattcctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacagtatggccagcagcaagatgcttaccaaggaccacct
ccccagcagggttatccaccccagcagcagcagtacccagggcagcagggctatccggga
cagcagcagggctatggtccttcacagggtggtccaggtcctcagtatcctaactatcca
cagggacaaggtcagcagtatggagggtatagaccaacacagcctggaccaccacagcca
ccacagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga

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