Equus caballus (horse): 100051844
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Entry
100051844 CDS
T01058
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100051844 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100051844 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100051844 (SS18)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100051844 (SS18)
GBAF(ncBAF) complex
100051844 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100051844
NCBI-ProteinID:
XP_023503359
Ensembl:
ENSECAG00000007703
VGNC:
23603
UniProt:
A0A3Q2H1Q2
LinkDB
All DBs
Position
8:complement(50675164..50755535)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMASDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNITNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagcccccaggcagcgaggcaaaggggagatcactcccgccgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tctcacaacatggcttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatataacaaacagttccatgaacatgccttcaagcagccatggatccatg
ggaggttacaaccattccgtgccatcatcacagagcatgccagtacagaatcagatgacg
atgagtcaagggcagccaatgggaaactacggccccagaccaaatatgaatatgcagcca
aaccaaggtccaatgatgcatcagcagcctccttctcaacaatacaatatgccacaggga
ggtgggcagcattaccaaggccaacagccacctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatggggcagagacagattcctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacagtatggccagcagcaagatgcttaccaaggaccacct
ccccagcagggttatccaccccagcagcagcagtacccagggcagcagggctatccggga
cagcagcagggctatggtccttcacagggtggtccaggtcctcagtatcctaactatcca
cagggacaaggtcagcagtatggagggtatagaccaacacagcctggaccaccacagcca
ccacagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system