Equus caballus (horse): 100051875
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Entry
100051875 CDS
T01058
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X4
KO
K16498
protocadherin delta 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100051875 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecb01009
]
100051875 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecb04515
]
100051875 (PCDH9)
Protein phosphatases and associated proteins [BR:
ecb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100051875 (PCDH9)
Cell adhesion molecules [BR:
ecb04515
]
Cadherins
Protocadherins
100051875 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
RCR
Motif
Other DBs
NCBI-GeneID:
100051875
NCBI-ProteinID:
XP_014587612
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All DBs
Position
17:complement(40547686..41428766)
Genome browser
AA seq
1195 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEESHYEPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGL
AEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRA
WKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQAGGAIESPKEHQL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggacgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgcgggc
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgttaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacagccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcctgtaggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaattcggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactaccgggctgattaccgttcagaggtccttagatcga
gaggagactgccattcacaaagtgacagtgctggctagtgatggcagctccactcccgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcctaacatagaccta
aggtacattataagtcccatcaatggcacagtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatacgacaaccagtatttg
ttagagacctcttctttgctggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagagcgattcattttt
acagtaactgcccgggacaatgggacccctccccttcaaagccaagcggctgtgatagtc
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattccggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctctactgcaaaa
gtaactatcaatgtcatggatgtcaatgacaatagcccagttgtcatttctccaccgtct
aacacttcctttaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt
tttgcagtggatattgacactgggatgaacgctgaacttaagtatacaatcgtgagtggg
aacaataaaggcttgtttcggattgacccagtcacaggtaacattactctggaagaaaaa
ccagcccctactgatgtgggcttgcaccgtttggtggtcaacataagtgacctgggatac
cctaagtctttgcacacacttgtgcttgtatttctttatgttaatgacactgctggaaat
gcctcctatatctatgacttgattcgcaggactatggagaccccattggacaggaacata
ggggatagtagccaaccctatcaaaatgaggactatctcaccatcatgatcgccattgtc
gccggcgccatggtggtcatagtcgtgatcttcgtcaccgttctggtgcgctgtcgccat
gcatcaaggttcaaagcagctcagaggagcaagcaaggtgctgaatggatgtcaccaaac
caagagaacaaacaaaacaagaaaaagaaaagaaagaaaagaaagtctcccaagagctct
cttttgaactttgttacaattgaagagtccaaacccgatgatgcagttcacgaacctatc
aatgggacaataagtctaccagctgagctggaggagcaaagtataggaagatttgactgg
ggcccagcacctccaacaaccttcaaacctaacagccctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatcttaaaccagacactccagtttctgtgaaaaag
catcacgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacattcaggagaat
gaagaaagccattacgagccacaggacgaattctacgaccaggcctctccggacaagagg
accgaggcggacggcaactctgaccccaactctgatgggcctctgggaccccgagggtta
gctgaagctacagaaatgtgcactcaagagtgcttggttttgggtcattctgataattgc
tggatgccacctggcttgggtccatatcaacaccctaaatctcctctctcaacctttgca
ccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacaccctgaccagagcc
tggaaagaagacagcaacaggaaccagttcaatgaccgtaagcagtatggctccaatgaa
ggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaagtcttat
aagcaagcaggaggtgctattgagagtcctaaggagcaccaactctaa
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