Equus caballus (horse): 100052319
Help
Entry
100052319 CDS
T01058
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecb04812
]
100052319 (KATNB1)
Cytoskeleton proteins [BR:
ecb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100052319 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
eIF2A
WDR54
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100052319
NCBI-ProteinID:
XP_001494571
Ensembl:
ENSECAG00000016979
VGNC:
19250
LinkDB
All DBs
Position
3:10605416..10626628
Genome browser
AA seq
655 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGMVAQDPVQDSRPLAQQPPHPSAPLRRIYERPSTACNKPQRVKQNSESERRS
PSSEDDRDERESQAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDVATAKEAAEP
SPAMDAQFPVPNLEVLARPPVVTSTPAPKAEPTIIPAARNEPIGLKASDFLPAVKIPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCYKQLKSISGFVKSKSGLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagacagcctggaagttgcaggagatcgtcgcccacgcc
agcaatgtgtcctcgctggtgctgggcaaagcctcggggcgcctgctggctaccggcggg
gacgactgccgcgtcaacctgtggtccatcaacaagcccaactgcatcatgagcctgacg
ggtcacacgtccccggtggagagtgtccgcctcaacacccccgaggagctcatcgtggcc
ggctcccagtcaggctccattcgcgtctgggacctggaagctgccaaaattctgcgcaca
ctcatgggacacaaagccaacatctgcagcctggatttccacccgtatggcgagttcgta
gcctcgggctcccaggacacaaacatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatacaggggccacagccaggccgtgcgctgtctccggttcagccctgacgggaag
tggttggcatcagctgcagatgaccacactgtgaagctctgggacctgactgctggcaag
atgatgtctgagttccctggccacacggggcctgtgaatgtggtggagtttcaccccaac
gagtacctcctggcttctggcagctctgacaggaccatccgtttctgggatctggagaag
ttccaggtggtgagctgcatcgaaggggagccggggcctgtgaggagtgtcctcttcaac
cccgatggctgctgcctgtacagcggctgccaggactcgctgcgcgtctatggctgggag
cccgagcgctgctttgatgtggtcctagtcaactggggcaaggtggctgacctggccatc
tgcaacgaccagctgataggcgtggccttctcccagagcaacgtctcctcttatgtggtg
gacctgacgcgggtcaccaggacaggcatggtggcccaggaccccgtgcaggacagccgg
cccctggcgcagcagccaccccaccccagcgccccccttcggcgcatctacgagcggccc
agcacggcctgcaacaagcctcagagggtgaagcagaactcggagagcgagcgccgcagc
cccagcagcgaggacgaccgggacgagcgggagtcccaggcggagatccagaacgctgag
gactacaacgagatcttccagcccaagaacagcatcagtcggacaccaccccggagaagc
gagcccttcccagcacccccggaggacgacgtggccacagcaaaggaagcagcagagccc
agcccagccatggacgcacagttcccagtgccaaatctcgaggtcctggcccggcccccc
gtcgtcacttccacccctgcacccaaggctgagcccaccatcatccctgctgcccggaac
gagcccatcgggctgaaggcctctgacttcctgcccgccgtgaagatcccccagcaggcg
gagctggtcgacgaggatgccatgtcacagatccgcaaaggccacgacaccatgtgcgtg
gtgctcactagccgccacaagaacctggacaccgtgagggctgtgtggaccacaggcgac
atcaagacttcagtggactcggctgtggccatcaatgacctgtcggtggtggtggacctc
ctcaacatcgtcaaccagaaagcctccttgtggaagctggacctgtgtaccacggtcctg
ccgcagatcgagaagcttctgcagagcaagtatgagagctatgtgcagacgggctgcacc
tccctgaagctgatcctgcagcggtttctgcccctcatcactgacatcctggcggccccg
ccctccgtgggtgtggacatcagccgggaggagaggctacacaagtgccggctgtgctac
aagcagctcaagagcatcagcgggtttgtcaagagcaagtcaggcctgagtggccgccac
ggcagtgccttccgcgagctgcacctgctcatggccagtctggactga
DBGET
integrated database retrieval system
