Equus caballus (horse): 100052355
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Entry
100052355 CDS
T01058
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100052355 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100052355 (PNPT1)
03016 Transfer RNA biogenesis [BR:
ecb03016
]
100052355 (PNPT1)
Enzymes [BR:
ecb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
100052355 (PNPT1)
Messenger RNA biogenesis [BR:
ecb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
100052355 (PNPT1)
Transfer RNA biogenesis [BR:
ecb03016
]
Prokaryotic type
tRNA degradation factors
100052355 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RST
Motif
Other DBs
NCBI-GeneID:
100052355
NCBI-ProteinID:
XP_005600030
Ensembl:
ENSECAG00000020058
VGNC:
21640
LinkDB
All DBs
Position
15:45589679..45633101
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AA seq
784 aa
AA seq
DB search
MAACRHCCSCLRLRPLGDGPLRLPGRDRALTQMQVRALWGGAGSRAVAVDLGSRKLEISS
GKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFLPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGVNEPDVLAINGASVALSLS
DIPWNGPVGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKVGVKYTQQIIQGIQQLVKEIGVTKRTPQKLFIPSPEIVKHTHKLAMERLYAVFT
DYEHDKISRDEAVNKIRLDTEEQLKEKFPEVDPYEIIESFNVVSKEVFRSIILNEYKRCD
GRDLTSLRNINCEVDMFKILHGSALFQRGQTQVLCTVTFDSLESSIKSDRIITAINGVND
KNFMLHYEFPPYATNEIGKVTGVNRRELGHGALAEKALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISTAVAGVAIGLVTKNNPDKGEIEDYRLLTDILGIEDYN
GDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASR
KENGPLVETIQVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSVFAPTPSAMHEA
RDFITEICKDDQEQQLEFGAVYTATITEIRDAGVMVKLYPNMTAVLLHNTQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVVKTLNDRSSIIMGESISQSSS
NSSR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcaggcattgctgctcgtgcctccggctccggcccctgggtgatggtccc
ctccgtctgccaggccgggatcgggcgctcacccagatgcaggtgcgagcactatggggt
ggcgcggggtctcgagccgtggccgtggacttaggcagcagaaaattagaaatatcctct
ggaaaactggccagatttgcagatggctctgctgtagtacagtcaggtgacactgcggtg
atggtcacagcagtcagtaaaacaaaaccttcaccttcccagttcttgcctttggtggtt
gactatagacagaaggctgctgcagcaggtagaattcccacaaactatcttagaagagag
attggttcttctgataaagaaattcttacaagtcgagtaatagatcgttcaattagacct
ctctttccagctggctacttttatgatacacaggtcctttgtaatctgttagcagtagat
ggtgttaatgaacctgatgtcctagcaattaatggtgcttctgtagccctctcattatca
gatattccttggaatggacctgttggggcagtacgaataggaatgattgatggagaatgt
gttgttaacccaacacgaaaagaaatgtcttccagtactttaaatttagtggttgctgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaacattttacagcaggac
ttttgccatgctatcaaagtgggagtaaaatatacacaacaaataatacagggcatccag
caattggtaaaagaaattggtgttaccaagaggacacctcagaagttatttatcccttcg
ccagagattgtgaaacacactcataaactcgccatggaaagactctatgcagtttttacg
gattatgaacatgataaaatttccagagatgaagctgttaacaagataagattagataca
gaggaacaactaaaagaaaaatttccagaggttgatccatatgaaataatagaatccttc
aacgttgtctcgaaggaggtttttagaagtattattttgaatgaatacaaaaggtgtgat
ggtcgagatttaacttcacttaggaacataaattgtgaggtagatatgtttaaaattctt
catggatcagcattatttcaaaggggacaaacacaggtgctttgtaccgttacatttgat
tcattagaatccagtattaagtcagaccgaataataacagctataaatggagtaaatgat
aaaaactttatgctgcactatgagtttcctccttacgcaacaaatgaaattggcaaagtc
actggtgtaaacagaagagaacttgggcatggtgctcttgccgagaaagctttgtatcct
gttattcccaaagattttcctttcaccataagagtcacatctgaagtcctagagtcaaat
ggatcatcttctatggcatctgcatgtggcggaagtttagcattaatggatgcaggggtt
ccaatttcaactgctgttgcaggtgtggcaataggattggtcaccaaaaacaatcctgac
aagggtgaaatagaagattatcgtttgctgacagatattctgggaattgaagattacaat
ggtgacatggatttcaaaatagctggcactaataagggaataactgcattacaggctgat
attaaattacctggaataccaataaaaattgtaatggaggccattcaacaagcctcagtg
gcaaagaaggagatactacagattatgaacaaaactatttcaaaacctcgagcatctaga
aaagaaaatggacctcttgtagaaaccattcaggttccattatcaaaacgagcaaaattt
gttggaccaggtggatatcatttaaaaaaacttcaggctgaaacaggtgtaactattagt
caggtggatgaagaaacattttctgtatttgcaccaacacccagtgctatgcatgaagca
agagacttcattactgaaatctgcaaagatgatcaagaacagcaattagaatttggagca
gtatataccgctacaataactgaaatcagagatgctggagtaatggttaaactatatcct
aatatgactgcagtactacttcataacacacaacttgatcaacgaaagattaaacatccc
actgccctaggattagaagttggccaagaaattcaggtgaaatacttcgggcgtgatccg
gctgatggaagaatgaggctttctcgtaaagtgctccagtctccagctacaactgttgtc
aaaactctaaacgacagaagtagtattataatgggagaatctatttcacagtcatcatct
aattcttctcggtga
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